Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC012182.1-201ENST00000570133 895 ntBASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 AC007151.1-201ENST00000572774 483 ntBASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 MIR92B-201ENST00000607575 96 ntBASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 Z82243.1-201ENST00000609432 473 ntBASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 AL133215.3-201ENST00000609801 448 ntBASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 AC004696.1-201ENST00000614345 607 ntBASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.31□□□□□ -1.88
ZNF549Q6P9A3 USP8P1-201ENST00000494673 3183 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 MTND4P27-201ENST00000450813 1354 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 SMIM11P1-201ENST00000369586 178 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.395-201ENST00000383945 109 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RNU6-432P-201ENST00000384196 109 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RNU6-1297P-201ENST00000384415 104 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 MIR490-201ENST00000384865 128 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 MIR559-201ENST00000385188 96 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RNU6-821P-201ENST00000390995 107 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RNU6-550P-201ENST00000391057 101 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RNY4P36-201ENST00000391116 96 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AL592114.1-201ENST00000403842 483 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RPS29P4-201ENST00000414733 161 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC005517.2-201ENST00000424673 553 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC017083.1-201ENST00000428093 483 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 FTH1P6-201ENST00000430768 320 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 HMGN2P31-201ENST00000432430 273 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 USP9YP7-201ENST00000436723 430 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RPL35AP22-201ENST00000436855 335 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AL590399.6-201ENST00000446396 307 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 USP9YP32-201ENST00000452432 430 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 SNORD97-201ENST00000459187 142 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC027575.1-201ENST00000481064 460 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 Vault.1-201ENST00000516474 102 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 Y_RNA.711-201ENST00000516993 102 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC090136.1-201ENST00000520009 240 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 COPS8P3-201ENST00000526024 482 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 OR11H5P-201ENST00000554039 926 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AL669831.4-202ENST00000590817 238 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AL080274.1-201ENST00000605565 220 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC084781.2-201ENST00000615568 161 ntBASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ZNF549Q6P9A3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 API5P2-201ENST00000397055 1498 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC103710.2-202ENST00000641454 2853 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 XIAPP3-201ENST00000312918 795 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RNU6-82P-201ENST00000363970 107 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 MT-TC-201ENST00000387405 66 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 MIR670-201ENST00000390142 98 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 MIR548F5-201ENST00000408421 86 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RN7SKP158-201ENST00000410453 326 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 BX842559.1-201ENST00000419615 532 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RPS15AP6-201ENST00000420703 385 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 CKS1BP5-201ENST00000434172 273 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RPL21P112-201ENST00000434403 463 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 HMGB3P30-201ENST00000457863 606 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RNU7-170P-201ENST00000459303 61 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RN7SL442P-201ENST00000473804 320 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 ST13P14-201ENST00000474095 734 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RPS27AP1-201ENST00000475545 471 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC104806.1-201ENST00000508720 308 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 RNU6-685P-201ENST00000517088 95 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.29□□□□□ -1.88
ZNF549Q6P9A3 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms