Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 RBMY1HP-201ENST00000382759 1389 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 Y_RNA.23-201ENST00000362496 106 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 RNU1-134P-201ENST00000362935 165 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 MIR143-201ENST00000385300 106 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 SNORD96B-201ENST00000386148 79 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 Y_RNA.595-201ENST00000410403 105 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 SDHDP6-201ENST00000414693 480 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AL512844.2-201ENST00000433990 593 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AC005154.2-201ENST00000438110 379 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AL391987.1-201ENST00000441025 200 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AC009237.8-201ENST00000445492 379 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AL451050.1-201ENST00000450126 415 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AC127024.6-201ENST00000621598 424 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 AC048347.1-201ENST00000624621 427 ntBASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.07□□□□□ -1.76
CDPF1Q6NVV7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 Y_RNA.7-201ENST00000362352 102 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RNU4-84P-201ENST00000364200 139 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 U3.19-201ENST00000390893 196 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RPS3AP2-201ENST00000407190 754 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC007738.1-201ENST00000413892 348 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC009237.10-201ENST00000414112 510 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 OR2AM1P-201ENST00000422137 422 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RPL7AP61-201ENST00000443410 636 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 MTATP6P7-201ENST00000453315 681 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AURKAPS2-201ENST00000454983 333 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RPL23AP14-201ENST00000468281 468 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RN7SL174P-201ENST00000475578 289 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC097462.2-201ENST00000504623 481 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC020593.1-201ENST00000507399 299 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RNU5F-8P-201ENST00000515941 111 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 RNU6-191P-201ENST00000516295 94 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 SNORA31.8-201ENST00000516327 108 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 SUMO2P18-201ENST00000518873 252 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC233702.2-202ENST00000562547 291 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC055872.1-201ENST00000570978 278 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC068831.7-201ENST00000616954 363 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 BX005214.3-202ENST00000619809 325 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC008568.2-201ENST00000623862 2313 ntBASIC4.06□□□□□ -1.76
CDPF1Q6NVV7 AC110491.1-201ENST00000562191 2010 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 Y_RNA.75-201ENST00000362927 97 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 Y_RNA.238-201ENST00000364441 102 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 Y_RNA.357-201ENST00000365487 109 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 RNU6-658P-201ENST00000384606 106 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 MIR487A-201ENST00000385009 80 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 SNORA48.4-201ENST00000391089 134 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 AL133270.1-201ENST00000402635 279 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 AC092047.1-201ENST00000424997 240 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 AC008267.6-201ENST00000441664 139 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 HLA-DPA3-207ENST00000454398 229 ntBASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.05□□□□□ -1.76
CDPF1Q6NVV7 SCARNA10-201ENST00000459255 330 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms