Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU4-67P-201ENST00000364569 141 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 PRPS1P1-201ENST00000445305 876 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 NCOR1P1-202ENST00000486162 291 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC098862.1-201ENST00000504991 413 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC006518.2-201ENST00000542513 940 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 MTATP6P7-201ENST00000453315 681 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC021749.1-201ENST00000604322 607 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 BX322635.1-201ENST00000605804 496 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
VPS13DQ5THJ4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 RNU6-173P-201ENST00000364215 104 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 RABEPKP1-201ENST00000440529 1026 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC005741.1-201ENST00000511094 432 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AP003355.1-201ENST00000518956 587 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC010620.1-201ENST00000601088 1102 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 CYP2C61P-201ENST00000604072 290 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC145207.9-201ENST00000623802 325 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC020923.1-201ENST00000624021 917 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 SDAD1P2-201ENST00000441308 2028 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 MIR329-1-201ENST00000385028 80 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 MIR4713-201ENST00000582691 75 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC009296.1-201ENST00000443146 155 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC112518.2-201ENST00000508565 425 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC109635.4-202ENST00000531666 412 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC074051.3-201ENST00000570238 358 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AP000254.1-201ENST00000609934 520 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 AC104763.3-201ENST00000613765 618 ntBASIC0.29□□□□□ -2.36
VPS13DQ5THJ4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 MIR4299-201ENST00000577899 72 ntBASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 HMGB3P31-201ENST00000413333 595 ntBASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 AC040174.2-201ENST00000602701 465 ntBASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
VPS13DQ5THJ4 AC244098.2-201ENST00000422068 99 ntBASIC0.28□□□□□ -2.37
VPS13DQ5THJ4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.28□□□□□ -2.37
VPS13DQ5THJ4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.28□□□□□ -2.37
VPS13DQ5THJ4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.28□□□□□ -2.37
VPS13DQ5THJ4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.28□□□□□ -2.37
VPS13DQ5THJ4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.28□□□□□ -2.37
VPS13DQ5THJ4 AL139344.1-201ENST00000605228 195 ntBASIC0.28□□□□□ -2.37
VPS13DQ5THJ4 RPL21P66-201ENST00000426566 466 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AC002550.2-201ENST00000621246 394 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AL391516.1-201ENST00000554380 2449 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 Y_RNA.549-201ENST00000384657 102 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 RPL37P6-202ENST00000464216 403 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 RPL9P9-202ENST00000466501 579 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AC067838.1-201ENST00000606064 577 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 MTND4P6-201ENST00000438297 472 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 OR6C72P-201ENST00000451403 892 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 UBL5P1-201ENST00000507979 193 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 RPS4XP3-201ENST00000398541 413 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 SETP11-201ENST00000473027 690 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 RNU6-964P-201ENST00000516524 69 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 MIR4661-201ENST00000582720 75 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 AC024060.1-201ENST00000607052 494 ntBASIC0.27□□□□□ -2.37
VPS13DQ5THJ4 MIR10B-201ENST00000385011 110 ntBASIC0.26□□□□□ -2.37
VPS13DQ5THJ4 AC097463.2-201ENST00000421074 142 ntBASIC0.26□□□□□ -2.37
VPS13DQ5THJ4 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.26□□□□□ -2.37
VPS13DQ5THJ4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
VPS13DQ5THJ4 MIR92A1-201ENST00000385233 78 ntBASIC0.26□□□□□ -2.37
VPS13DQ5THJ4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13DQ5THJ4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS13DQ5THJ4 RNU6-347P-201ENST00000516658 105 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms