Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 HMGN2P9-201ENST00000476875 229 ntBASIC0.34□□□□□ -2.35
UBR4Q5T4S7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.34□□□□□ -2.35
UBR4Q5T4S7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.34□□□□□ -2.35
UBR4Q5T4S7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
UBR4Q5T4S7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
UBR4Q5T4S7 SDCBPP1-201ENST00000440192 890 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 OR5AL2P-201ENST00000532185 920 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AC112503.2-201ENST00000609005 552 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AC092634.6-201ENST00000418558 192 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 HMGB3P30-201ENST00000457863 606 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AC117503.1-201ENST00000472241 394 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC0.34□□□□□ -2.36
UBR4Q5T4S7 HSPE1P20-201ENST00000538133 289 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AGGF1P5-201ENST00000567900 919 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 Z75741.2-201ENST00000417272 1167 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AL022238.1-201ENST00000442557 355 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AL360221.1-201ENST00000445989 335 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 SNRPGP3-201ENST00000469405 227 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AC010625.1-201ENST00000511296 403 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 SCARNA21.1-201ENST00000515996 128 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AL138726.1-201ENST00000614873 333 ntBASIC0.34□□□□□ -2.36
UBR4Q5T4S7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.34□□□□□ -2.36
UBR4Q5T4S7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 DUXAP4-201ENST00000603046 613 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AC008759.3-201ENST00000613300 508 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 XIAPP3-201ENST00000312918 795 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 RNU6-40P-201ENST00000384254 107 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 RPS27P23-201ENST00000487608 251 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 RNA5SP227-201ENST00000516184 113 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AC011155.2-201ENST00000623202 216 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 RNU2-40P-201ENST00000410833 196 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 RPL23AP3-201ENST00000453844 468 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 HMGB3P17-201ENST00000504195 649 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 OR5AK1P-201ENST00000524837 922 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 MIR5194-201ENST00000582634 120 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 MIR4645-201ENST00000583158 77 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 RNU4-52P-201ENST00000384209 138 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 MTND5P15-201ENST00000434246 349 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 RPS27P21-201ENST00000486977 252 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AL669831.4-202ENST00000590817 238 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 MIR203B-201ENST00000636080 86 ntBASIC0.33□□□□□ -2.36
UBR4Q5T4S7 AC005592.1-201ENST00000566527 1640 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 PTGES3P2-201ENST00000407942 482 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AL627224.1-201ENST00000448334 444 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC068647.2-201ENST00000637380 353 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 RPS6P14-201ENST00000425165 719 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC092451.1-201ENST00000480211 153 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AP001025.1-201ENST00000486139 332 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC025627.3-201ENST00000582078 182 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 Z80107.1-201ENST00000436830 412 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 CFTRP1-201ENST00000456646 183 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.32□□□□□ -2.36
UBR4Q5T4S7 MIR6840-201ENST00000611937 71 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC020658.4-201ENST00000613987 684 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 AC090617.7-201ENST00000623952 126 ntBASIC0.32□□□□□ -2.36
UBR4Q5T4S7 U8.7-201ENST00000364940 136 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 Y_RNA.533-201ENST00000384596 114 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 MIR144-201ENST00000384886 86 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC079780.1-201ENST00000428259 207 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AL121769.1-201ENST00000469473 401 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC079148.1-201ENST00000565944 819 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 MIR3122-201ENST00000577243 73 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 MTCO2P8-201ENST00000412213 658 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 PABPC1P3-201ENST00000469174 459 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 MIR6738-201ENST00000619620 64 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 MTND5P32-201ENST00000560711 1802 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 SNORA16B-201ENST00000364674 135 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 RNU4-9P-201ENST00000364951 139 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC092832.1-201ENST00000422934 400 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC104108.1-201ENST00000509930 412 ntBASIC0.31□□□□□ -2.36
UBR4Q5T4S7 AC136618.2-201ENST00000575091 400 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms