Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC097655.1-201ENST00000635075 318 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 SNORA67.1-201ENST00000364749 141 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 RNU4-72P-201ENST00000410754 173 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 RPS15AP28-201ENST00000435088 386 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 CBWD4P-201ENST00000445695 655 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AL353705.4-201ENST00000449661 238 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC027673.1-201ENST00000456245 405 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 RPL37P25-201ENST00000507308 276 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC007115.1-201ENST00000546853 234 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 PCMTD1P2-201ENST00000565017 355 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC091489.2-201ENST00000566263 604 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AL356432.3-201ENST00000568952 465 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC112187.2-201ENST00000604345 283 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 BX664608.1-201ENST00000610519 487 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC122133.1-201ENST00000613964 233 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC013476.2-201ENST00000614456 459 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 MIR7843-201ENST00000622274 79 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 AC079248.2-201ENST00000623779 326 ntBASIC2.74□□□□□ -1.97
SHROOM1Q2M3G4 RNA5SP393-201ENST00000363423 117 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-553P-201ENST00000364047 96 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 SNORA25.6-201ENST00000364121 118 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-533P-201ENST00000384144 107 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-278P-201ENST00000390945 109 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AL023284.1-201ENST00000403956 276 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 RNU4-26P-201ENST00000410270 107 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AL451054.2-201ENST00000420896 202 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 MTND4P20-201ENST00000424125 869 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AL049734.2-201ENST00000441066 616 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC009296.1-201ENST00000443146 155 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AP000705.1-201ENST00000454567 350 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 RNU7-59P-201ENST00000459101 61 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AP000852.1-201ENST00000472460 573 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 RPL9P6-201ENST00000492764 598 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC005178.1-201ENST00000508392 440 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC026407.1-201ENST00000518369 204 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 ZNF519P3-201ENST00000557158 1032 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 TRAV28-201ENST00000557548 323 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC009063.1-201ENST00000563342 702 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC068135.2-201ENST00000569293 1028 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 NIFKP6-201ENST00000598115 845 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC068057.2-201ENST00000624047 895 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC079416.3-201ENST00000624479 549 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC006927.3-201ENST00000638789 384 ntBASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.73□□□□□ -1.97
SHROOM1Q2M3G4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-223P-201ENST00000362830 107 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 RNY4P16-201ENST00000364768 94 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 SNORA67.3-201ENST00000384366 140 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 SNORA64-201ENST00000384674 134 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 TIMM9P1-201ENST00000436122 256 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC098862.1-201ENST00000504991 413 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 MIR548AB-201ENST00000584917 84 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC067747.1-201ENST00000608026 250 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AC009159.1-201ENST00000618386 642 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 AL160394.1-201ENST00000624765 724 ntBASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM1Q2M3G4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
SHROOM1Q2M3G4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
SHROOM1Q2M3G4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 RNU1-51P-201ENST00000365345 176 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 OR5H15-201ENST00000383696 930 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms