Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SF3B3Q15393 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SF3B3Q15393 Y_RNA.184-201ENST00000363884 108 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU1-140P-201ENST00000365040 165 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 Y_RNA.394-201ENST00000383942 103 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU6-38P-201ENST00000384085 107 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 SNORD37.1-201ENST00000390968 65 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU6-903P-201ENST00000391270 109 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 MIR1302-11-201ENST00000408051 138 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 MIR1302-9-201ENST00000408365 138 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 MIR1302-10-201ENST00000408734 138 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 MIR1289-1-201ENST00000408836 144 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU2-47P-201ENST00000410649 186 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.98□□□□□ -1.77
SF3B3Q15393 AC002075.2-201ENST00000425207 252 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RPL23AP82-202ENST00000427528 469 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 AC005094.1-201ENST00000440420 368 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU6-333P-201ENST00000459117 107 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU6-329P-201ENST00000459618 107 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 CENPBD1P1-201ENST00000464061 469 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 ST13P14-201ENST00000474095 734 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.98□□□□□ -1.77
SF3B3Q15393 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU4-49P-201ENST00000516080 140 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RNU6-64P-201ENST00000517119 105 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 RN7SKP289-201ENST00000517244 295 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.98□□□□□ -1.77
SF3B3Q15393 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.98□□□□□ -1.77
SF3B3Q15393 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.98□□□□□ -1.77
SF3B3Q15393 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.98□□□□□ -1.77
SF3B3Q15393 UBL5P2-201ENST00000583788 219 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 MIR4293-201ENST00000584305 78 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 MIR1302-2-201ENST00000607096 138 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 PLCE1P1-201ENST00000622094 305 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.98□□□□□ -1.77
SF3B3Q15393 AC007256.1-201ENST00000392253 2765 ntBASIC3.98□□□□□ -1.77
SF3B3Q15393 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.98□□□□□ -1.77
SF3B3Q15393 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.98□□□□□ -1.77
SF3B3Q15393 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SF3B3Q15393 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SF3B3Q15393 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SF3B3Q15393 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.97□□□□□ -1.77
SF3B3Q15393 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SF3B3Q15393 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.97□□□□□ -1.77
SF3B3Q15393 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SF3B3Q15393 RNU6-552P-201ENST00000362869 119 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 SNORA62.1-201ENST00000364287 154 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SF3B3Q15393 RNU6-641P-201ENST00000384006 107 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 Y_RNA.474-201ENST00000384341 102 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 MT-TC-201ENST00000387405 66 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SF3B3Q15393 AL136372.1-201ENST00000403060 228 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 TXNP7-201ENST00000406296 293 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 RNU2-36P-201ENST00000410361 191 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 RNU6-516P-201ENST00000411381 104 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 TOMM22P1-201ENST00000418578 312 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 NCOR1P3-201ENST00000420479 303 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 COTL1P1-201ENST00000422309 375 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AC018630.2-202ENST00000422992 927 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.97□□□□□ -1.77
SF3B3Q15393 AC007547.1-201ENST00000462177 490 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AC135721.1-201ENST00000497954 479 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 Y_RNA.691-201ENST00000516611 103 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 MIR2276-201ENST00000516886 89 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 FAM60DP-201ENST00000524174 632 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AP002404.1-201ENST00000532005 451 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.97□□□□□ -1.77
SF3B3Q15393 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.97□□□□□ -1.77
SF3B3Q15393 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.97□□□□□ -1.77
SF3B3Q15393 MIR4424-201ENST00000585257 86 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.97□□□□□ -1.77
SF3B3Q15393 IGHV3-29-201ENST00000604817 344 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AC093838.1-201ENST00000613014 469 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AP001486.3-201ENST00000615334 372 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AC006386.2-201ENST00000624491 75 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 AC012005.1-201ENST00000624575 75 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 MIR622-201ENST00000638396 96 ntBASIC3.97□□□□□ -1.77
SF3B3Q15393 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SF3B3Q15393 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.97□□□□□ -1.77
SF3B3Q15393 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SF3B3Q15393 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SF3B3Q15393 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SF3B3Q15393 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SF3B3Q15393 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SF3B3Q15393 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SF3B3Q15393 RNA5SP295-201ENST00000362655 121 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 Y_RNA.67-201ENST00000362870 100 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RNU6-522P-201ENST00000364497 107 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RNU5E-6P-201ENST00000365574 115 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 Y_RNA.419-201ENST00000384041 102 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RNU6-1029P-201ENST00000384109 107 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RNU6-821P-201ENST00000390995 107 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RNU6-754P-201ENST00000391166 107 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RPL5P18-201ENST00000406671 891 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RNA5SP56-201ENST00000410277 118 ntBASIC3.96□□□□□ -1.78
SF3B3Q15393 RNU2-29P-201ENST00000410423 189 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms