Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.43□□□□□ -2.34
TFF3Q07654 CUL4AP1-201ENST00000514750 1863 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 ZNF37BP-203ENST00000452306 1352 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 RNU6-222P-201ENST00000362438 107 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 RNU6-492P-201ENST00000363035 104 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 Y_RNA.251-201ENST00000364551 99 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 SNORA25.8-201ENST00000364831 128 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 VTRNA1-3-201ENST00000365645 89 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 RNA5SP212-201ENST00000391223 107 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 RPL23AP32-201ENST00000395315 459 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.42□□□□□ -2.34
TFF3Q07654 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.42□□□□□ -2.34
TFF3Q07654 AC013410.2-201ENST00000422627 201 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
TFF3Q07654 RPS15AP27-201ENST00000449183 343 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.42□□□□□ -2.34
TFF3Q07654 RNU6-322P-201ENST00000516010 103 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.42□□□□□ -2.34
TFF3Q07654 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.42□□□□□ -2.34
TFF3Q07654 AC011260.1-201ENST00000578420 472 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.42□□□□□ -2.34
TFF3Q07654 AC025588.2-201ENST00000604851 466 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 AC095031.1-201ENST00000623685 672 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 AL512506.2-201ENST00000624472 458 ntBASIC0.42□□□□□ -2.34
TFF3Q07654 MTND5P11-201ENST00000511037 1812 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 Y_RNA.85-201ENST00000363014 111 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 RNA5SP257-201ENST00000363023 116 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 FTH1P15-201ENST00000406984 280 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 MIR1197-201ENST00000408818 88 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 RNU6-733P-201ENST00000410759 104 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 RPS20P10-201ENST00000451209 253 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AC008379.1-201ENST00000463655 464 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.41□□□□□ -2.34
TFF3Q07654 MRPS36P2-201ENST00000512569 299 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 Y_RNA.681-201ENST00000516445 113 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.41□□□□□ -2.34
TFF3Q07654 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.41□□□□□ -2.34
TFF3Q07654 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.41□□□□□ -2.34
TFF3Q07654 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.41□□□□□ -2.34
TFF3Q07654 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.41□□□□□ -2.34
TFF3Q07654 AC021749.1-201ENST00000604322 607 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AC084824.5-201ENST00000612009 413 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AL365204.3-201ENST00000612448 685 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AL356585.4-201ENST00000623078 1229 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.41□□□□□ -2.34
TFF3Q07654 MIR7515-201ENST00000637837 67 ntBASIC0.41□□□□□ -2.34
TFF3Q07654 AC083875.1-201ENST00000419509 405 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.4□□□□□ -2.35
TFF3Q07654 ELOCP11-201ENST00000436690 332 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 ELOCP16-201ENST00000444494 332 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.4□□□□□ -2.35
TFF3Q07654 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.4□□□□□ -2.35
TFF3Q07654 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.4□□□□□ -2.35
TFF3Q07654 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.4□□□□□ -2.35
TFF3Q07654 LINC00557-201ENST00000563184 1279 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.4□□□□□ -2.35
TFF3Q07654 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.4□□□□□ -2.35
TFF3Q07654 AC021171.1-201ENST00000603137 706 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 XIAPP1-201ENST00000603162 600 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 MIR2909-201ENST00000617113 69 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 OR4G3P-201ENST00000633500 913 ntBASIC0.4□□□□□ -2.35
TFF3Q07654 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
TFF3Q07654 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
TFF3Q07654 MIR30A-201ENST00000385092 71 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 AL034374.1-201ENST00000406329 351 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.39□□□□□ -2.35
TFF3Q07654 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.39□□□□□ -2.35
TFF3Q07654 Z82190.1-201ENST00000454534 490 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 BX248409.1-201ENST00000455497 255 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.39□□□□□ -2.35
TFF3Q07654 AC138853.1-201ENST00000503549 823 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 AC004062.1-201ENST00000509926 645 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.39□□□□□ -2.35
TFF3Q07654 AC005668.1-201ENST00000571142 476 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 MIR4422-201ENST00000581938 83 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 MTCO2P22-201ENST00000603246 681 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 DUXAP11-201ENST00000603858 526 ntBASIC0.39□□□□□ -2.35
TFF3Q07654 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.39□□□□□ -2.35
TFF3Q07654 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TFF3Q07654 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.39□□□□□ -2.35
TFF3Q07654 AC123912.3-201ENST00000600907 1367 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 RNU1-36P-201ENST00000365130 165 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 RN7SKP158-201ENST00000410453 326 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 RNU2-70P-201ENST00000410718 179 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 RNA5SP127-201ENST00000411051 133 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 HMGB3P31-201ENST00000413333 595 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 PIGFP2-201ENST00000421400 651 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.38□□□□□ -2.35
TFF3Q07654 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.38□□□□□ -2.35
TFF3Q07654 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.38□□□□□ -2.35
TFF3Q07654 AP001269.3-201ENST00000588718 329 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 AC090970.3-201ENST00000612566 866 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 AL590410.1-201ENST00000617925 333 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 AC068787.1-201ENST00000623908 691 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 FAM157B-203ENST00000639350 358 ntBASIC0.38□□□□□ -2.35
TFF3Q07654 AC010329.5-201ENST00000623497 2174 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms