Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LSM6P62312 SNRPEP3-201ENST00000338402 276 ntBASIC1.46□□□□□ -2.18
LSM6P62312 RNU6-223P-201ENST00000362830 107 ntBASIC1.46□□□□□ -2.18
LSM6P62312 RNU6-216P-201ENST00000363282 104 ntBASIC1.46□□□□□ -2.18
LSM6P62312 U8.3-201ENST00000363321 132 ntBASIC1.46□□□□□ -2.18
LSM6P62312 RNU2-68P-201ENST00000410878 191 ntBASIC1.46□□□□□ -2.18
LSM6P62312 EIF4EP2-201ENST00000422816 654 ntBASIC1.46□□□□□ -2.18
LSM6P62312 MTND1P28-201ENST00000435623 950 ntBASIC1.46□□□□□ -2.18
LSM6P62312 HMGB3P12-201ENST00000438745 556 ntBASIC1.46□□□□□ -2.18
LSM6P62312 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.46□□□□□ -2.18
LSM6P62312 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.46□□□□□ -2.18
LSM6P62312 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.46□□□□□ -2.18
LSM6P62312 RPL23AP63-201ENST00000498752 471 ntBASIC1.46□□□□□ -2.18
LSM6P62312 RNU6-295P-201ENST00000516901 104 ntBASIC1.46□□□□□ -2.18
LSM6P62312 AC023632.1-201ENST00000518463 375 ntBASIC1.46□□□□□ -2.18
LSM6P62312 DUXAP5-201ENST00000529668 529 ntBASIC1.46□□□□□ -2.18
LSM6P62312 AL121821.2-201ENST00000556081 394 ntBASIC1.46□□□□□ -2.18
LSM6P62312 AC092953.2-201ENST00000608000 699 ntBASIC1.46□□□□□ -2.18
LSM6P62312 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
LSM6P62312 MTCO1P4-201ENST00000520516 1409 ntBASIC1.46□□□□□ -2.18
LSM6P62312 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LSM6P62312 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
LSM6P62312 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LSM6P62312 Y_RNA.234-201ENST00000364409 97 ntBASIC1.45□□□□□ -2.18
LSM6P62312 RNU6-754P-201ENST00000391166 107 ntBASIC1.45□□□□□ -2.18
LSM6P62312 SNORA26.9-201ENST00000391322 122 ntBASIC1.45□□□□□ -2.18
LSM6P62312 MTND1P21-201ENST00000412991 285 ntBASIC1.45□□□□□ -2.18
LSM6P62312 USP9YP6-201ENST00000413550 854 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AL353621.1-201ENST00000418219 243 ntBASIC1.45□□□□□ -2.18
LSM6P62312 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.45□□□□□ -2.18
LSM6P62312 AL355994.1-201ENST00000424379 260 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.45□□□□□ -2.18
LSM6P62312 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
LSM6P62312 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LSM6P62312 snoU13.15-201ENST00000459407 104 ntBASIC1.45□□□□□ -2.18
LSM6P62312 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
LSM6P62312 RNU6-927P-201ENST00000516199 100 ntBASIC1.45□□□□□ -2.18
LSM6P62312 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AC084851.1-201ENST00000529105 249 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AP005435.4-201ENST00000529514 284 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.45□□□□□ -2.18
LSM6P62312 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.45□□□□□ -2.18
LSM6P62312 MTCO2P15-201ENST00000532655 656 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AK6P1-201ENST00000540219 478 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.45□□□□□ -2.18
LSM6P62312 ZNF971P-201ENST00000562068 1249 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AC022254.1-201ENST00000567857 235 ntBASIC1.45□□□□□ -2.18
LSM6P62312 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.45□□□□□ -2.18
LSM6P62312 MIR4789-201ENST00000577469 82 ntBASIC1.45□□□□□ -2.18
LSM6P62312 SNRPGP17-201ENST00000603780 214 ntBASIC1.45□□□□□ -2.18
LSM6P62312 OR4H6P-202ENST00000603819 340 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AL139344.1-201ENST00000605228 195 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AC100814.1-201ENST00000606963 623 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AL109620.1-201ENST00000618738 1197 ntBASIC1.45□□□□□ -2.18
LSM6P62312 AC019226.1-201ENST00000625666 515 ntBASIC1.45□□□□□ -2.18
LSM6P62312 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LSM6P62312 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
LSM6P62312 ZNF876P-202ENST00000398732 1485 ntBASIC1.44□□□□□ -2.18
LSM6P62312 AL356292.1-201ENST00000283110 373 ntBASIC1.44□□□□□ -2.18
LSM6P62312 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
LSM6P62312 RNU6-792P-201ENST00000363490 107 ntBASIC1.44□□□□□ -2.18
LSM6P62312 U6.112-201ENST00000384129 70 ntBASIC1.44□□□□□ -2.18
LSM6P62312 AL590084.2-201ENST00000401481 382 ntBASIC1.44□□□□□ -2.18
LSM6P62312 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.44□□□□□ -2.18
LSM6P62312 MTCYBP15-201ENST00000433123 1127 ntBASIC1.44□□□□□ -2.18
LSM6P62312 HMGN2P3-201ENST00000433603 273 ntBASIC1.44□□□□□ -2.18
LSM6P62312 ZFAND6P1-201ENST00000434138 605 ntBASIC1.44□□□□□ -2.18
LSM6P62312 HMGN2P5-201ENST00000436882 273 ntBASIC1.44□□□□□ -2.18
LSM6P62312 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM6P62312 AC007677.1-201ENST00000445757 515 ntBASIC1.44□□□□□ -2.18
LSM6P62312 AL513124.1-201ENST00000450410 614 ntBASIC1.44□□□□□ -2.18
LSM6P62312 KATNBL1P6-201ENST00000453433 915 ntBASIC1.44□□□□□ -2.18
LSM6P62312 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.44□□□□□ -2.18
LSM6P62312 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM6P62312 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM6P62312 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.44□□□□□ -2.18
LSM6P62312 AP000873.5-201ENST00000533906 236 ntBASIC1.44□□□□□ -2.18
LSM6P62312 NDUFA5P6-201ENST00000542110 379 ntBASIC1.44□□□□□ -2.18
LSM6P62312 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.44□□□□□ -2.18
LSM6P62312 ZNF92P2-201ENST00000600543 1059 ntBASIC1.44□□□□□ -2.18
LSM6P62312 AC108479.2-201ENST00000617314 601 ntBASIC1.44□□□□□ -2.18
LSM6P62312 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.44□□□□□ -2.18
LSM6P62312 AC002543.1-201ENST00000299783 1954 ntBASIC1.44□□□□□ -2.18
LSM6P62312 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.43□□□□□ -2.18
LSM6P62312 UBE2L2-201ENST00000254302 429 ntBASIC1.43□□□□□ -2.18
LSM6P62312 MIR126-201ENST00000362291 85 ntBASIC1.43□□□□□ -2.18
LSM6P62312 MIR29C-201ENST00000385231 88 ntBASIC1.43□□□□□ -2.18
LSM6P62312 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
LSM6P62312 PTGES3P2-201ENST00000407942 482 ntBASIC1.43□□□□□ -2.18
LSM6P62312 DPRXP1-201ENST00000426312 460 ntBASIC1.43□□□□□ -2.18
LSM6P62312 AL353706.1-201ENST00000436728 494 ntBASIC1.43□□□□□ -2.18
LSM6P62312 SEPT14P24-201ENST00000447236 180 ntBASIC1.43□□□□□ -2.18
LSM6P62312 AL137159.1-201ENST00000452808 512 ntBASIC1.43□□□□□ -2.18
LSM6P62312 CECR9-201ENST00000453421 199 ntBASIC1.43□□□□□ -2.18
LSM6P62312 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.43□□□□□ -2.18
LSM6P62312 AC096745.1-201ENST00000509945 370 ntBASIC1.43□□□□□ -2.18
LSM6P62312 AC110760.3-202ENST00000515177 371 ntBASIC1.43□□□□□ -2.18
LSM6P62312 snoZ278.1-201ENST00000517059 112 ntBASIC1.43□□□□□ -2.18
LSM6P62312 RNA5SP165-201ENST00000517142 115 ntBASIC1.43□□□□□ -2.18
LSM6P62312 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms