Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A1P61619 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.12□□□□□ -1.91
SEC61A1P61619 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A1P61619 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.12□□□□□ -1.91
SEC61A1P61619 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.12□□□□□ -1.91
SEC61A1P61619 MIR3942-201ENST00000585264 109 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 BNIP3P25-201ENST00000596023 559 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.12□□□□□ -1.91
SEC61A1P61619 SNORA62.6-201ENST00000606322 83 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AL133255.1-201ENST00000606374 441 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 SDR42E1P2-201ENST00000614861 481 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AP001486.3-201ENST00000615334 372 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.12□□□□□ -1.91
SEC61A1P61619 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 AL357559.1-201ENST00000622228 274 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AC119674.1-207ENST00000641355 633 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 AL732372.2-225ENST00000642124 456 ntBASIC3.12□□□□□ -1.91
SEC61A1P61619 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SEC61A1P61619 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEC61A1P61619 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A1P61619 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A1P61619 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.11□□□□□ -1.91
SEC61A1P61619 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
SEC61A1P61619 RNA5SP51-201ENST00000364750 119 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.11□□□□□ -1.91
SEC61A1P61619 XGY1-201ENST00000381172 446 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 Y_RNA.460-201ENST00000384255 102 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 Y_RNA.474-201ENST00000384341 102 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 RNU6-14P-201ENST00000384630 106 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 CISD1P1-201ENST00000393907 327 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.11□□□□□ -1.91
SEC61A1P61619 SYF2P2-201ENST00000417620 583 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.11□□□□□ -1.91
SEC61A1P61619 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.11□□□□□ -1.91
SEC61A1P61619 RPS3AP46-201ENST00000448352 682 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 RNU7-66P-201ENST00000459469 62 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 RNU6-1208P-201ENST00000459588 107 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 RPL9P32-201ENST00000464118 620 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AC091885.1-201ENST00000506658 268 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 HMGN1P11-201ENST00000508668 303 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 GMPSP1-201ENST00000514075 579 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.11□□□□□ -1.91
SEC61A1P61619 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.11□□□□□ -1.91
SEC61A1P61619 MIR5187-201ENST00000583479 76 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AC067852.3-201ENST00000589177 561 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AC006116.10-201ENST00000591836 581 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AC092747.3-201ENST00000603769 301 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 AC007998.5-201ENST00000622938 237 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 MTND1P37-201ENST00000636562 264 ntBASIC3.11□□□□□ -1.91
SEC61A1P61619 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A1P61619 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A1P61619 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SEC61A1P61619 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A1P61619 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.1□□□□□ -1.91
SEC61A1P61619 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEC61A1P61619 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SEC61A1P61619 Y_RNA.100-201ENST00000363141 102 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 DEFB109C-201ENST00000382575 264 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 DEFB109B-201ENST00000382656 264 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 Y_RNA.414-201ENST00000384011 101 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 MIR514A1-201ENST00000385133 98 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 AL592114.1-201ENST00000403842 483 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RNA5SP129-201ENST00000410276 118 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RNU4-46P-201ENST00000410818 138 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RNU6-1304P-201ENST00000411374 106 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 AC091390.3-201ENST00000426478 338 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 CALM2P2-201ENST00000428512 440 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 AC005019.1-201ENST00000436455 431 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RPS15AP27-201ENST00000449183 343 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.1□□□□□ -1.91
SEC61A1P61619 Y_RNA.632-201ENST00000459189 102 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RPL31P60-201ENST00000478450 367 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RNU6-685P-201ENST00000517088 95 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 AC026403.1-201ENST00000518938 295 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.1□□□□□ -1.91
SEC61A1P61619 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
SEC61A1P61619 AC004024.1-201ENST00000549244 247 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.1□□□□□ -1.91
SEC61A1P61619 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.1□□□□□ -1.91
SEC61A1P61619 ATP1B3P1-201ENST00000605365 821 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 RNU1-30P-201ENST00000606575 163 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 Z82243.1-201ENST00000609432 473 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEC61A1P61619 uc_338.15-201ENST00000615470 191 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 uc_338.11-201ENST00000619132 160 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 AP003400.5-201ENST00000624827 617 ntBASIC3.1□□□□□ -1.91
SEC61A1P61619 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.1□□□□□ -1.91
SEC61A1P61619 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEC61A1P61619 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SEC61A1P61619 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEC61A1P61619 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SEC61A1P61619 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A1P61619 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SEC61A1P61619 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A1P61619 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A1P61619 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms