Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC4P56524 RNU6-483P-201ENST00000384088 108 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 SNORA48.2-201ENST00000390926 124 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 RNU2-39P-201ENST00000410604 198 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC4P56524 RPL7P10-201ENST00000417407 739 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 AC093151.1-201ENST00000427711 313 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.35□□□□□ -1.87
HDAC4P56524 RPL36AP6-201ENST00000435770 321 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 TAAR7P-201ENST00000436141 242 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC4P56524 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 AC022364.2-201ENST00000457963 554 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC4P56524 RPS20P22-201ENST00000473700 357 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.35□□□□□ -1.87
HDAC4P56524 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 OR5B19P-201ENST00000531766 928 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HDAC4P56524 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC4P56524 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.35□□□□□ -1.87
HDAC4P56524 AC092325.1-201ENST00000566449 554 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 MIR3609-201ENST00000582661 80 ntBASIC3.35□□□□□ -1.87
HDAC4P56524 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HDAC4P56524 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.34□□□□□ -1.87
HDAC4P56524 RNY4P14-201ENST00000363656 96 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 U8.9-201ENST00000365667 134 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC4P56524 RNU6-741P-201ENST00000383889 107 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 SNORA26.7-201ENST00000391288 122 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 BTF3P7-201ENST00000407097 488 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 MRPL50P2-201ENST00000416821 482 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC4P56524 AL606489.2-201ENST00000433886 234 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 CBWD4P-201ENST00000445695 655 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.34□□□□□ -1.87
HDAC4P56524 AC126389.1-201ENST00000477436 290 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 FAM92A1P2-202ENST00000504766 877 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.34□□□□□ -1.87
HDAC4P56524 AC109927.2-201ENST00000506416 303 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC117522.1-201ENST00000509821 380 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
HDAC4P56524 SNORA31.3-201ENST00000516029 96 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 RNU6-927P-201ENST00000516199 100 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.34□□□□□ -1.87
HDAC4P56524 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC4P56524 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC4P56524 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
HDAC4P56524 AL512360.1-201ENST00000555346 234 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC4P56524 AC012507.3-201ENST00000603556 477 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC013553.2-201ENST00000604244 589 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 HSPE1P7-201ENST00000604681 321 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC093788.1-201ENST00000609356 927 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC4P56524 MIR6852-201ENST00000621699 66 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC091903.1-201ENST00000624322 454 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC005609.4-201ENST00000625071 447 ntBASIC3.34□□□□□ -1.87
HDAC4P56524 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC4P56524 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC4P56524 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.34□□□□□ -1.87
HDAC4P56524 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC4P56524 Y_RNA.9-201ENST00000362354 101 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 RNU6-1085P-201ENST00000363576 107 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 SNORA24.1-201ENST00000384401 135 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HDAC4P56524 UBE2V1P2-201ENST00000397758 440 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC4P56524 HSPE1P1-201ENST00000421494 318 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 MTCYBP5-201ENST00000423752 1135 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AC104332.2-201ENST00000429959 156 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 HMGB1P27-201ENST00000431429 603 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC4P56524 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC4P56524 NEFMP1-201ENST00000443423 1006 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 CACYBPP2-201ENST00000453625 678 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AP001486.1-201ENST00000463339 476 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 MRPS17P3-201ENST00000465453 385 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC4P56524 AC110794.1-201ENST00000505816 425 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
HDAC4P56524 SNORA40.12-201ENST00000516329 111 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 RNU6-835P-201ENST00000516974 104 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.33□□□□□ -1.88
HDAC4P56524 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC4P56524 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.33□□□□□ -1.88
HDAC4P56524 AC025678.1-201ENST00000567861 338 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 MTCO3P24-201ENST00000572729 782 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 MIR4801-201ENST00000582704 82 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AC008752.3-201ENST00000588113 712 ntBASIC3.33□□□□□ -1.88
HDAC4P56524 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms