Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC103710.2-201ENST00000609912 942 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC025594.3-201ENST00000613068 790 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC104010.1-201ENST00000616889 150 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AL449363.1-201ENST00000617815 186 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AL356266.1-201ENST00000623311 483 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PKNOX1P55347 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
PKNOX1P55347 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX1P55347 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.24□□□□□ -2.05
PKNOX1P55347 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX1P55347 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC010889.1-201ENST00000566193 2666 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX1P55347 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AL591416.1-201ENST00000404015 867 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 RNU2-36P-201ENST00000410361 191 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX1P55347 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX1P55347 HMGB1P9-201ENST00000429856 646 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX1P55347 RPS15AP28-201ENST00000435088 386 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 AC108938.1-201ENST00000451204 136 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC068587.2-201ENST00000478386 781 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 AC096576.1-201ENST00000489014 359 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 RNU6-703P-201ENST00000516946 107 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX1P55347 RPL7P20-201ENST00000520308 745 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 AC022616.6-201ENST00000520479 119 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX1P55347 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.24□□□□□ -2.05
PKNOX1P55347 AC107294.1-201ENST00000609524 467 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.24□□□□□ -2.05
PKNOX1P55347 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX1P55347 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX1P55347 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PKNOX1P55347 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
PKNOX1P55347 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PKNOX1P55347 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX1P55347 RNU5F-6P-201ENST00000362979 116 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 RNU6-188P-201ENST00000364207 107 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 RNY4P16-201ENST00000364768 94 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX1P55347 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 MTND5P2-201ENST00000442927 1142 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 NEFMP1-201ENST00000443423 1006 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 OSTCP8-201ENST00000445117 448 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 COX6CP12-201ENST00000446748 202 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 TRBV1-201ENST00000476502 284 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 GZMAP1-201ENST00000503054 631 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 RNU4-29P-201ENST00000515943 174 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 SNORA31.6-201ENST00000516241 130 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 EEF1A1P37-201ENST00000522748 715 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PKNOX1P55347 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.23□□□□□ -2.05
PKNOX1P55347 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC009094.1-201ENST00000564443 426 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX1P55347 MIR3118-1-201ENST00000581787 76 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AC091953.2-201ENST00000623979 160 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.23□□□□□ -2.05
PKNOX1P55347 AL445523.1-201ENST00000451184 1362 ntBASIC2.23□□□□□ -2.05
PKNOX1P55347 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.23□□□□□ -2.05
PKNOX1P55347 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PKNOX1P55347 SMIM11P1-201ENST00000369586 178 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
PKNOX1P55347 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX1P55347 RNU6-1083P-201ENST00000384022 107 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 MORF4L1P6-201ENST00000418771 268 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 RAC1P6-201ENST00000423911 575 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AL353729.1-201ENST00000425044 720 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AC093106.2-201ENST00000428212 385 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AL365184.2-201ENST00000431139 435 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 HMGB1P27-201ENST00000431429 603 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.22□□□□□ -2.05
PKNOX1P55347 AL591719.1-201ENST00000444669 744 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX1P55347 RNU6-1129P-201ENST00000515964 104 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 MTND4LP18-201ENST00000526864 291 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms