Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC118465.1-201ENST00000513820 1271 ntBASIC2.34□□□□□ -2.03
LIM2P55344 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 Y_RNA.672-201ENST00000516289 104 ntBASIC2.34□□□□□ -2.03
LIM2P55344 RNA5SP471-201ENST00000516971 106 ntBASIC2.34□□□□□ -2.03
LIM2P55344 SNORA31.26-201ENST00000517250 137 ntBASIC2.34□□□□□ -2.03
LIM2P55344 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.34□□□□□ -2.03
LIM2P55344 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.34□□□□□ -2.03
LIM2P55344 ARL2BPP2-201ENST00000550907 489 ntBASIC2.34□□□□□ -2.03
LIM2P55344 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 AC234778.2-201ENST00000566241 354 ntBASIC2.34□□□□□ -2.03
LIM2P55344 ROCK1P1-201ENST00000573767 549 ntBASIC2.34□□□□□ -2.03
LIM2P55344 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 MIR3682-201ENST00000581338 84 ntBASIC2.34□□□□□ -2.03
LIM2P55344 NRBF2P5-201ENST00000603087 788 ntBASIC2.34□□□□□ -2.03
LIM2P55344 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
LIM2P55344 AC019226.2-201ENST00000625973 424 ntBASIC2.34□□□□□ -2.03
LIM2P55344 MTND5P42-201ENST00000637720 498 ntBASIC2.34□□□□□ -2.03
LIM2P55344 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.34□□□□□ -2.03
LIM2P55344 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
LIM2P55344 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
LIM2P55344 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.04
LIM2P55344 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.34□□□□□ -2.04
LIM2P55344 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.33□□□□□ -2.04
LIM2P55344 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIM2P55344 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIM2P55344 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIM2P55344 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIM2P55344 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIM2P55344 AC073343.1-201ENST00000328239 651 ntBASIC2.33□□□□□ -2.04
LIM2P55344 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LIM2P55344 U3.12-201ENST00000364498 214 ntBASIC2.33□□□□□ -2.04
LIM2P55344 U8.8-201ENST00000365399 135 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RNU1-73P-201ENST00000383971 164 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RNU6-701P-201ENST00000384059 107 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RPL23AP32-201ENST00000395315 459 ntBASIC2.33□□□□□ -2.04
LIM2P55344 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LIM2P55344 AL162578.1-201ENST00000406202 378 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RNU2-36P-201ENST00000410361 191 ntBASIC2.33□□□□□ -2.04
LIM2P55344 BTF3L4P3-201ENST00000418879 476 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RPS15AP12-201ENST00000419498 388 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.33□□□□□ -2.04
LIM2P55344 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 BPY2DP-201ENST00000422208 265 ntBASIC2.33□□□□□ -2.04
LIM2P55344 CYCSP46-201ENST00000423569 204 ntBASIC2.33□□□□□ -2.04
LIM2P55344 GTF2IP20-201ENST00000431663 360 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 AC119618.1-201ENST00000434191 222 ntBASIC2.33□□□□□ -2.04
LIM2P55344 PGBD4P3-201ENST00000440731 581 ntBASIC2.33□□□□□ -2.04
LIM2P55344 Z96811.1-201ENST00000445880 108 ntBASIC2.33□□□□□ -2.04
LIM2P55344 WASF1P1-201ENST00000447560 1131 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 RNA5SP269-201ENST00000459032 137 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RPS26P21-201ENST00000475397 348 ntBASIC2.33□□□□□ -2.04
LIM2P55344 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.33□□□□□ -2.04
LIM2P55344 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 RNU6-677P-201ENST00000516914 101 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RNU6-703P-201ENST00000516946 107 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RNA5SP337-201ENST00000517007 109 ntBASIC2.33□□□□□ -2.04
LIM2P55344 RNA5SP165-201ENST00000517142 115 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.33□□□□□ -2.04
LIM2P55344 AP003122.4-201ENST00000530980 758 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.33□□□□□ -2.04
LIM2P55344 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.33□□□□□ -2.04
LIM2P55344 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.33□□□□□ -2.04
LIM2P55344 HMGN2P15-201ENST00000585707 270 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AC007363.1-201ENST00000604736 620 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AC019159.1-201ENST00000605094 187 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AP002360.4-201ENST00000606980 481 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AC007494.3-201ENST00000624660 743 ntBASIC2.33□□□□□ -2.04
LIM2P55344 AC025048.6-202ENST00000627667 438 ntBASIC2.33□□□□□ -2.04
LIM2P55344 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.33□□□□□ -2.04
LIM2P55344 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
LIM2P55344 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.32□□□□□ -2.04
LIM2P55344 SNORD116-8-201ENST00000384365 95 ntBASIC2.32□□□□□ -2.04
LIM2P55344 MT-TH-201ENST00000387441 69 ntBASIC2.32□□□□□ -2.04
LIM2P55344 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.32□□□□□ -2.04
LIM2P55344 RPL7P37-201ENST00000425095 738 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AL591704.1-201ENST00000432574 275 ntBASIC2.32□□□□□ -2.04
LIM2P55344 RPL36AP53-201ENST00000432891 316 ntBASIC2.32□□□□□ -2.04
LIM2P55344 RPS15AP5-201ENST00000436276 388 ntBASIC2.32□□□□□ -2.04
LIM2P55344 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.32□□□□□ -2.04
LIM2P55344 MTND6P13-201ENST00000443510 523 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AC104389.3-201ENST00000445629 235 ntBASIC2.32□□□□□ -2.04
LIM2P55344 CECR9-201ENST00000453421 199 ntBASIC2.32□□□□□ -2.04
LIM2P55344 snoU109.1-201ENST00000459339 135 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AC128713.1-201ENST00000471495 306 ntBASIC2.32□□□□□ -2.04
LIM2P55344 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.32□□□□□ -2.04
LIM2P55344 RPS27AP10-201ENST00000496103 208 ntBASIC2.32□□□□□ -2.04
LIM2P55344 SUMO2P6-201ENST00000505273 288 ntBASIC2.32□□□□□ -2.04
LIM2P55344 AC010587.1-201ENST00000505809 469 ntBASIC2.32□□□□□ -2.04
LIM2P55344 RNU6-143P-201ENST00000516942 93 ntBASIC2.32□□□□□ -2.04
LIM2P55344 RPL7P20-201ENST00000520308 745 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms