Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL157687.1-201ENST00000554853 619 ntBASIC2.89□□□□□ -1.95
CDH11P55287 TRAV28-201ENST00000557548 323 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AC025678.1-201ENST00000567861 338 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.89□□□□□ -1.95
CDH11P55287 AC002545.1-201ENST00000592511 181 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AC098826.3-201ENST00000603823 466 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AC093788.1-201ENST00000609356 927 ntBASIC2.89□□□□□ -1.95
CDH11P55287 AL390240.1-201ENST00000612950 384 ntBASIC2.89□□□□□ -1.95
CDH11P55287 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH11P55287 MIR1321-201ENST00000637766 79 ntBASIC2.89□□□□□ -1.95
CDH11P55287 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH11P55287 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CDH11P55287 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH11P55287 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH11P55287 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CDH11P55287 GABRG2-229ENST00000641017 3628 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC110774.1-201ENST00000623567 2018 ntBASIC2.88□□□□□ -1.95
CDH11P55287 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH11P55287 AC006020.1-201ENST00000420179 1854 ntBASIC2.88□□□□□ -1.95
CDH11P55287 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH11P55287 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH11P55287 UBE2L2-201ENST00000254302 429 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RNU6-1167P-201ENST00000363227 94 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RNU6-179P-201ENST00000363350 107 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RNU6-483P-201ENST00000384088 108 ntBASIC2.88□□□□□ -1.95
CDH11P55287 Y_RNA.450-201ENST00000384198 113 ntBASIC2.88□□□□□ -1.95
CDH11P55287 Y_RNA.481-201ENST00000384373 102 ntBASIC2.88□□□□□ -1.95
CDH11P55287 Y_RNA.576-201ENST00000384781 102 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RNU6-908P-201ENST00000410160 94 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RPS12P24-201ENST00000412619 387 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH11P55287 MTCYBP5-201ENST00000423752 1135 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RPL7P54-201ENST00000438336 674 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH11P55287 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH11P55287 ELOCP23-201ENST00000452014 332 ntBASIC2.88□□□□□ -1.95
CDH11P55287 GMFBP1-201ENST00000467831 427 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RPS23P3-201ENST00000470993 430 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RPL21P13-201ENST00000488305 481 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RPL39P36-201ENST00000490784 156 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC092436.1-201ENST00000506450 503 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RBBP4P6-201ENST00000508098 202 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AF213884.2-201ENST00000510417 903 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.88□□□□□ -1.95
CDH11P55287 AC105417.1-201ENST00000514691 285 ntBASIC2.88□□□□□ -1.95
CDH11P55287 RN7SKP282-201ENST00000516824 299 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH11P55287 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH11P55287 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH11P55287 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.88□□□□□ -1.95
CDH11P55287 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.88□□□□□ -1.95
CDH11P55287 OR5AL2P-201ENST00000532185 920 ntBASIC2.88□□□□□ -1.95
CDH11P55287 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
CDH11P55287 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH11P55287 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.88□□□□□ -1.95
CDH11P55287 AL512360.1-201ENST00000555346 234 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.88□□□□□ -1.95
CDH11P55287 MTATP6P3-201ENST00000581686 676 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC012493.2-201ENST00000595083 291 ntBASIC2.88□□□□□ -1.95
CDH11P55287 BNIP3P30-201ENST00000601184 574 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC136601.2-201ENST00000604356 474 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC007621.1-201ENST00000604544 437 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AL161798.1-201ENST00000604630 131 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC073657.2-201ENST00000605661 303 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC068944.2-201ENST00000610373 403 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC012409.4-201ENST00000612923 249 ntBASIC2.88□□□□□ -1.95
CDH11P55287 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH11P55287 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH11P55287 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH11P55287 ELF2P3-201ENST00000445099 1506 ntBASIC2.88□□□□□ -1.95
CDH11P55287 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CDH11P55287 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH11P55287 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDH11P55287 Y_RNA.9-201ENST00000362354 101 ntBASIC2.87□□□□□ -1.95
CDH11P55287 RNU6-288P-201ENST00000363690 104 ntBASIC2.87□□□□□ -1.95
CDH11P55287 RNU6-1090P-201ENST00000364065 94 ntBASIC2.87□□□□□ -1.95
CDH11P55287 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CDH11P55287 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH11P55287 UBE2V1P2-201ENST00000397758 440 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AL591416.1-201ENST00000404015 867 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AL031121.1-201ENST00000406553 254 ntBASIC2.87□□□□□ -1.95
CDH11P55287 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.87□□□□□ -1.95
CDH11P55287 RN7SKP123-201ENST00000410732 291 ntBASIC2.87□□□□□ -1.95
CDH11P55287 MRPL50P2-201ENST00000416821 482 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 AL353678.1-201ENST00000422735 741 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 AC244505.4-201ENST00000434905 287 ntBASIC2.87□□□□□ -1.95
CDH11P55287 Z82210.1-201ENST00000440037 231 ntBASIC2.87□□□□□ -1.95
CDH11P55287 SSXP5-201ENST00000443473 287 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AL118520.1-201ENST00000450770 291 ntBASIC2.87□□□□□ -1.95
CDH11P55287 FABP5P15-201ENST00000453566 214 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AL162395.1-201ENST00000457882 422 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH11P55287 AC233702.1-201ENST00000482905 502 ntBASIC2.87□□□□□ -1.95
CDH11P55287 AC117522.3-201ENST00000507974 584 ntBASIC2.87□□□□□ -1.95
CDH11P55287 Y_RNA.689-201ENST00000516589 107 ntBASIC2.87□□□□□ -1.95
CDH11P55287 RNU6-1282P-201ENST00000516735 96 ntBASIC2.87□□□□□ -1.95
CDH11P55287 Y_RNA.704-201ENST00000516851 102 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms