Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.15□□□□□ -2.23
GTF2A1P52655 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.15□□□□□ -2.23
GTF2A1P52655 RMST_6.1-201ENST00000611980 203 ntBASIC1.15□□□□□ -2.23
GTF2A1P52655 AC026634.1-201ENST00000634369 198 ntBASIC1.15□□□□□ -2.23
GTF2A1P52655 AC097655.1-201ENST00000635075 318 ntBASIC1.15□□□□□ -2.23
GTF2A1P52655 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
GTF2A1P52655 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.14□□□□□ -2.23
GTF2A1P52655 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
GTF2A1P52655 RPL23AP36-201ENST00000413895 458 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.14□□□□□ -2.23
GTF2A1P52655 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 PPP1R11P2-201ENST00000423543 382 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 USP9YP24-201ENST00000434374 697 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 HMGB1P31-201ENST00000437242 427 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 DYNLT3P2-201ENST00000442517 295 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 AL137159.1-201ENST00000452808 512 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.14□□□□□ -2.23
GTF2A1P52655 RNU1-123P-201ENST00000458950 160 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.14□□□□□ -2.23
GTF2A1P52655 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
GTF2A1P52655 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.14□□□□□ -2.23
GTF2A1P52655 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.14□□□□□ -2.23
GTF2A1P52655 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.14□□□□□ -2.23
GTF2A1P52655 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.14□□□□□ -2.23
GTF2A1P52655 AC099842.1-201ENST00000619919 596 ntBASIC1.14□□□□□ -2.23
GTF2A1P52655 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.14□□□□□ -2.23
GTF2A1P52655 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.14□□□□□ -2.23
GTF2A1P52655 Z75746.1-201ENST00000440243 2080 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 Y_RNA.111-201ENST00000363248 100 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 MIR561-201ENST00000385216 97 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 NDUFS5P4-201ENST00000412983 318 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 AC009310.1-201ENST00000414414 451 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.13□□□□□ -2.23
GTF2A1P52655 MTCO1P53-201ENST00000441633 699 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 ARPC3P5-201ENST00000448802 534 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.13□□□□□ -2.23
GTF2A1P52655 RPL23AP23-201ENST00000452590 471 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.13□□□□□ -2.23
GTF2A1P52655 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.13□□□□□ -2.23
GTF2A1P52655 AC008481.1-201ENST00000463278 396 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 RPL39P28-201ENST00000465655 155 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 RPL22P13-201ENST00000493291 347 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.13□□□□□ -2.23
GTF2A1P52655 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.13□□□□□ -2.23
GTF2A1P52655 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.13□□□□□ -2.23
GTF2A1P52655 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
GTF2A1P52655 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.13□□□□□ -2.23
GTF2A1P52655 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.13□□□□□ -2.23
GTF2A1P52655 AP001429.1-201ENST00000602568 530 ntBASIC1.13□□□□□ -2.23
GTF2A1P52655 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
GTF2A1P52655 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
GTF2A1P52655 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.12□□□□□ -2.23
GTF2A1P52655 MIR16-1-201ENST00000385271 89 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 MIR1283-2-201ENST00000408621 87 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 PIGPP2-201ENST00000411569 458 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 OR6C66P-201ENST00000414917 930 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 USP9YP35-201ENST00000435696 412 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.12□□□□□ -2.23
GTF2A1P52655 AL050341.1-201ENST00000447743 313 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AL590365.1-201ENST00000450788 243 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AL353691.1-201ENST00000451332 387 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.12□□□□□ -2.23
GTF2A1P52655 AC005908.1-201ENST00000468701 347 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AC018868.1-201ENST00000491307 315 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.12□□□□□ -2.23
GTF2A1P52655 AC093677.1-201ENST00000514414 678 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 SNORD19.2-201ENST00000516978 73 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.12□□□□□ -2.23
GTF2A1P52655 NACAP3-201ENST00000552100 481 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.12□□□□□ -2.23
GTF2A1P52655 LARP7P2-201ENST00000575306 125 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.12□□□□□ -2.23
GTF2A1P52655 AC091152.3-201ENST00000604227 325 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AC108479.2-201ENST00000617314 601 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 AP003485.1-201ENST00000625093 753 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 SGO1P1-201ENST00000603525 1447 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
GTF2A1P52655 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.12□□□□□ -2.23
GTF2A1P52655 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
GTF2A1P52655 MTND5P11-201ENST00000511037 1812 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 RNU6-1222P-201ENST00000384615 107 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 SNORD116-23-201ENST00000384645 92 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 MIR518D-201ENST00000385014 87 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AC078974.1-201ENST00000411597 223 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 USP9YP19-201ENST00000412165 485 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 USP9YP13-201ENST00000417797 480 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.11□□□□□ -2.23
GTF2A1P52655 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.11□□□□□ -2.23
GTF2A1P52655 HMGB3P12-201ENST00000438745 556 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AC092170.1-201ENST00000440211 356 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AL691517.1-201ENST00000440833 1235 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 CR769776.1-201ENST00000441254 787 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 RPL23AP76-201ENST00000441860 458 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.11□□□□□ -2.23
GTF2A1P52655 RPS20P20-201ENST00000460498 340 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 AC004223.1-201ENST00000479840 271 ntBASIC1.11□□□□□ -2.23
GTF2A1P52655 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms