Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP293-201ENST00000410527 113 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCN3P51790 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCN3P51790 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.27□□□□□ -1.89
CLCN3P51790 NEK4P1-201ENST00000433383 879 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC002486.1-201ENST00000435098 391 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCN3P51790 SSXP4-201ENST00000451349 245 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCN3P51790 AC069439.1-201ENST00000494739 167 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCN3P51790 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCN3P51790 RNU6-410P-201ENST00000517006 107 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 RNU6-1220P-201ENST00000517126 108 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 RNA5SP291-201ENST00000517222 105 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AP006587.4-201ENST00000526053 529 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC022690.1-201ENST00000526681 550 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCN3P51790 HMGB1P14-201ENST00000557424 591 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 TRAV28-201ENST00000557548 323 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 MTCO3P24-201ENST00000572729 782 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC007363.1-201ENST00000604736 620 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC034102.8-201ENST00000615146 484 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC002076.2-201ENST00000617362 122 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 MIR6076-201ENST00000617521 113 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC007998.5-201ENST00000622938 237 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 AC099654.14-201ENST00000638599 341 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CLCN3P51790 AC007785.2-201ENST00000598627 1916 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
CLCN3P51790 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLCN3P51790 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCN3P51790 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCN3P51790 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCN3P51790 RNU6-1090P-201ENST00000364065 94 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 RNU6-534P-201ENST00000364877 106 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 RNU6-867P-201ENST00000364956 107 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 Y_RNA.402-201ENST00000383972 102 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 SNORA18.3-201ENST00000384122 132 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 Y_RNA.510-201ENST00000384511 114 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 RPS4XP3-201ENST00000398541 413 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 RNU2-33P-201ENST00000410344 192 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCN3P51790 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCN3P51790 GPR143P-201ENST00000434155 205 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCN3P51790 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.26□□□□□ -1.89
CLCN3P51790 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCN3P51790 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 RPL31P58-201ENST00000469001 379 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.26□□□□□ -1.89
CLCN3P51790 AC007182.2-201ENST00000489251 402 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCN3P51790 AC074344.1-201ENST00000512823 224 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 AC010493.1-201ENST00000513479 292 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCN3P51790 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.26□□□□□ -1.89
CLCN3P51790 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCN3P51790 AC068135.2-201ENST00000569293 1028 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 MIR548S-201ENST00000581352 82 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCN3P51790 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCN3P51790 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CLCN3P51790 AC002553.4-201ENST00000616896 331 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
CLCN3P51790 AC027309.3-201ENST00000623419 351 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCN3P51790 MTND1P37-201ENST00000636562 264 ntBASIC3.26□□□□□ -1.89
CLCN3P51790 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CLCN3P51790 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCN3P51790 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCN3P51790 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCN3P51790 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCN3P51790 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCN3P51790 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCN3P51790 SNORA5B-201ENST00000363786 132 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 Y_RNA.409-201ENST00000383990 98 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC245291.1-201ENST00000419501 328 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.25□□□□□ -1.89
CLCN3P51790 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCN3P51790 RPS15AP9-201ENST00000439856 381 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 Z82210.1-201ENST00000440037 231 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 RPL23AP20-201ENST00000447965 421 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AL590664.1-201ENST00000448065 339 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC027673.1-201ENST00000456245 405 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC022364.2-201ENST00000457963 554 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 RNU6-420P-201ENST00000458780 107 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC092989.1-201ENST00000481235 277 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC083906.5-201ENST00000503722 328 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.25□□□□□ -1.89
CLCN3P51790 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.25□□□□□ -1.89
CLCN3P51790 HMGB1P41-201ENST00000520234 440 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 CASP1P1-201ENST00000526345 212 ntBASIC3.25□□□□□ -1.89
CLCN3P51790 AC109635.3-201ENST00000529536 185 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms