Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC009033.1-201ENST00000624279 431 ntBASIC3.21□□□□□ -1.9
CENPAP49450 FAM35BP-202ENST00000497389 3337 ntBASIC3.21□□□□□ -1.9
CENPAP49450 Z83843.1-201ENST00000604070 3685 ntBASIC3.21□□□□□ -1.9
CENPAP49450 OR4G1P-203ENST00000641984 1631 ntBASIC3.21□□□□□ -1.9
CENPAP49450 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CENPAP49450 CUL1P1-201ENST00000509510 2425 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AL139276.1-201ENST00000311910 1001 ntBASIC3.2□□□□□ -1.9
CENPAP49450 Y_RNA.126-201ENST00000363382 111 ntBASIC3.2□□□□□ -1.9
CENPAP49450 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CENPAP49450 RNA5SP38-201ENST00000410750 119 ntBASIC3.2□□□□□ -1.9
CENPAP49450 RNU6-193P-201ENST00000410977 107 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AL160275.3-201ENST00000423876 471 ntBASIC3.2□□□□□ -1.9
CENPAP49450 MTCO2P3-201ENST00000442543 421 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AL357552.1-201ENST00000445254 415 ntBASIC3.2□□□□□ -1.9
CENPAP49450 MTND4P18-201ENST00000447010 465 ntBASIC3.2□□□□□ -1.9
CENPAP49450 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CENPAP49450 FCF1P3-201ENST00000496394 590 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AC025465.4-201ENST00000513422 638 ntBASIC3.2□□□□□ -1.9
CENPAP49450 RNU6-358P-201ENST00000516564 75 ntBASIC3.2□□□□□ -1.9
CENPAP49450 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.2□□□□□ -1.9
CENPAP49450 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.2□□□□□ -1.9
CENPAP49450 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.2□□□□□ -1.9
CENPAP49450 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.2□□□□□ -1.9
CENPAP49450 uc_338.34-201ENST00000617467 174 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AL357559.1-201ENST00000622228 274 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AC027309.3-201ENST00000623419 351 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.2□□□□□ -1.9
CENPAP49450 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.2□□□□□ -1.9
CENPAP49450 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CENPAP49450 CASC19-280ENST00000642102 1351 ntBASIC3.2□□□□□ -1.9
CENPAP49450 AL049641.1-201ENST00000441055 1948 ntBASIC3.19□□□□□ -1.9
CENPAP49450 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
CENPAP49450 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
CENPAP49450 RNA5SP479-201ENST00000364858 117 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CENPAP49450 MIR301A-201ENST00000385261 86 ntBASIC3.19□□□□□ -1.9
CENPAP49450 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CENPAP49450 RN7SKP123-201ENST00000410732 291 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RNU6-373P-201ENST00000411247 98 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.19□□□□□ -1.9
CENPAP49450 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.19□□□□□ -1.9
CENPAP49450 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.19□□□□□ -1.9
CENPAP49450 SAR1AP4-201ENST00000429225 591 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RPL36AP53-201ENST00000432891 316 ntBASIC3.19□□□□□ -1.9
CENPAP49450 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.19□□□□□ -1.9
CENPAP49450 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.19□□□□□ -1.9
CENPAP49450 MTND3P16-201ENST00000452205 344 ntBASIC3.19□□□□□ -1.9
CENPAP49450 CECR9-201ENST00000453421 199 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RNU7-180P-201ENST00000459240 63 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RPL21P99-201ENST00000480369 423 ntBASIC3.19□□□□□ -1.9
CENPAP49450 RPL38P4-201ENST00000502376 214 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.19□□□□□ -1.9
CENPAP49450 SNORA70.19-201ENST00000516717 90 ntBASIC3.19□□□□□ -1.9
CENPAP49450 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.19□□□□□ -1.9
CENPAP49450 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AC134698.4-201ENST00000523451 826 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AL137161.1-201ENST00000532231 390 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AL138976.2-201ENST00000563989 694 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CENPAP49450 RN7SL703P-201ENST00000578485 302 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CENPAP49450 MIR548S-201ENST00000581352 82 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
CENPAP49450 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
CENPAP49450 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AL138880.2-201ENST00000616214 239 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
CENPAP49450 AC099654.14-201ENST00000638599 341 ntBASIC3.19□□□□□ -1.9
CENPAP49450 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CENPAP49450 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.19□□□□□ -1.9
CENPAP49450 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 ZNF285B-201ENST00000561698 1767 ntBASIC3.18□□□□□ -1.9
CENPAP49450 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPAP49450 SNORA4.3-201ENST00000365564 137 ntBASIC3.18□□□□□ -1.9
CENPAP49450 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CENPAP49450 Y_RNA.390-201ENST00000383932 102 ntBASIC3.18□□□□□ -1.9
CENPAP49450 Y_RNA.534-201ENST00000384599 112 ntBASIC3.18□□□□□ -1.9
CENPAP49450 SNORA26.7-201ENST00000391288 122 ntBASIC3.18□□□□□ -1.9
CENPAP49450 RPS4XP3-201ENST00000398541 413 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AC063979.1-201ENST00000415539 377 ntBASIC3.18□□□□□ -1.9
CENPAP49450 RPL30P16-201ENST00000419341 429 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.18□□□□□ -1.9
CENPAP49450 AL591704.1-201ENST00000432574 275 ntBASIC3.18□□□□□ -1.9
CENPAP49450 SCARNA18-201ENST00000459004 134 ntBASIC3.18□□□□□ -1.9
CENPAP49450 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
CENPAP49450 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AC084357.1-201ENST00000473404 255 ntBASIC3.18□□□□□ -1.9
CENPAP49450 RPS29P25-201ENST00000481709 171 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AC018710.1-201ENST00000506509 158 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AF235103.2-201ENST00000525753 346 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CENPAP49450 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.18□□□□□ -1.9
CENPAP49450 BNIP3P6-201ENST00000549284 499 ntBASIC3.18□□□□□ -1.9
CENPAP49450 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.18□□□□□ -1.9
CENPAP49450 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms