Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.12□□□□□ -1.91
HADHAP40939 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.12□□□□□ -1.91
HADHAP40939 MIR4325-201ENST00000583049 90 ntBASIC3.12□□□□□ -1.91
HADHAP40939 AC073648.5-201ENST00000603502 305 ntBASIC3.12□□□□□ -1.91
HADHAP40939 AC012409.4-201ENST00000612923 249 ntBASIC3.12□□□□□ -1.91
HADHAP40939 AC130324.3-201ENST00000614165 542 ntBASIC3.12□□□□□ -1.91
HADHAP40939 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HADHAP40939 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HADHAP40939 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HADHAP40939 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HADHAP40939 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HADHAP40939 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.11□□□□□ -1.91
HADHAP40939 RNU6-395P-201ENST00000365662 106 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.11□□□□□ -1.91
HADHAP40939 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.11□□□□□ -1.91
HADHAP40939 SKA2P1-201ENST00000425592 390 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AL358075.3-201ENST00000426289 226 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.11□□□□□ -1.91
HADHAP40939 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
HADHAP40939 RPS15AP5-201ENST00000436276 388 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.11□□□□□ -1.91
HADHAP40939 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.11□□□□□ -1.91
HADHAP40939 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.11□□□□□ -1.91
HADHAP40939 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HADHAP40939 AC113155.1-201ENST00000511141 769 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AC010493.1-201ENST00000513479 292 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
HADHAP40939 AC024619.4-201ENST00000580924 316 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AL035413.2-201ENST00000604801 525 ntBASIC3.11□□□□□ -1.91
HADHAP40939 MTND4LP5-201ENST00000605152 292 ntBASIC3.11□□□□□ -1.91
HADHAP40939 MIR15A-201ENST00000607334 83 ntBASIC3.11□□□□□ -1.91
HADHAP40939 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.11□□□□□ -1.91
HADHAP40939 AL589743.7-201ENST00000612637 233 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AC091834.1-201ENST00000614543 472 ntBASIC3.11□□□□□ -1.91
HADHAP40939 AP001486.3-201ENST00000615334 372 ntBASIC3.11□□□□□ -1.91
HADHAP40939 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HADHAP40939 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HADHAP40939 MTND4P35-201ENST00000604257 1375 ntBASIC3.11□□□□□ -1.91
HADHAP40939 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
HADHAP40939 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HADHAP40939 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HADHAP40939 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.1□□□□□ -1.91
HADHAP40939 RNU6-1119P-201ENST00000384349 108 ntBASIC3.1□□□□□ -1.91
HADHAP40939 SNORA24.1-201ENST00000384401 135 ntBASIC3.1□□□□□ -1.91
HADHAP40939 MIR634-201ENST00000385208 97 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AL031121.1-201ENST00000406553 254 ntBASIC3.1□□□□□ -1.91
HADHAP40939 RNA5SP492-201ENST00000411330 114 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AL353729.1-201ENST00000425044 720 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.1□□□□□ -1.91
HADHAP40939 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.1□□□□□ -1.91
HADHAP40939 MTND4P32-201ENST00000437189 1237 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AC079448.1-201ENST00000449377 373 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.1□□□□□ -1.91
HADHAP40939 RPL27AP5-201ENST00000469428 449 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AC023194.1-201ENST00000493084 308 ntBASIC3.1□□□□□ -1.91
HADHAP40939 RN7SL504P-201ENST00000494496 287 ntBASIC3.1□□□□□ -1.91
HADHAP40939 SUMO2P6-201ENST00000505273 288 ntBASIC3.1□□□□□ -1.91
HADHAP40939 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.1□□□□□ -1.91
HADHAP40939 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.1□□□□□ -1.91
HADHAP40939 SNORD27.1-201ENST00000516319 72 ntBASIC3.1□□□□□ -1.91
HADHAP40939 RNU6-1220P-201ENST00000517126 108 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.1□□□□□ -1.91
HADHAP40939 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.1□□□□□ -1.91
HADHAP40939 AP001646.1-201ENST00000527936 915 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AL157871.3-201ENST00000557231 293 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.1□□□□□ -1.91
HADHAP40939 H3F3AP1-201ENST00000559984 334 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
HADHAP40939 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HADHAP40939 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.1□□□□□ -1.91
HADHAP40939 MIR3611-201ENST00000584484 83 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
HADHAP40939 AC078899.3-201ENST00000599065 212 ntBASIC3.1□□□□□ -1.91
HADHAP40939 uc_338.11-201ENST00000619132 160 ntBASIC3.1□□□□□ -1.91
HADHAP40939 AC025034.2-201ENST00000623264 286 ntBASIC3.1□□□□□ -1.91
HADHAP40939 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HADHAP40939 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HADHAP40939 AC026241.1-201ENST00000517873 2142 ntBASIC3.1□□□□□ -1.91
HADHAP40939 Y_RNA.33-201ENST00000362591 102 ntBASIC3.09□□□□□ -1.91
HADHAP40939 RNU6-61P-201ENST00000365528 109 ntBASIC3.09□□□□□ -1.91
HADHAP40939 SNORA48.2-201ENST00000390926 124 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
HADHAP40939 AC114491.1-201ENST00000416095 246 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AL513477.1-202ENST00000417061 214 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.09□□□□□ -1.91
HADHAP40939 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.09□□□□□ -1.91
HADHAP40939 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.09□□□□□ -1.91
HADHAP40939 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
HADHAP40939 MTATP6P16-201ENST00000434543 526 ntBASIC3.09□□□□□ -1.91
HADHAP40939 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
HADHAP40939 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HADHAP40939 AC132479.1-201ENST00000449160 144 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.09□□□□□ -1.91
HADHAP40939 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.09□□□□□ -1.91
HADHAP40939 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.09□□□□□ -1.91
HADHAP40939 C1DP4-201ENST00000455429 424 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AL122001.1-201ENST00000457027 370 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.09□□□□□ -1.91
HADHAP40939 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms