Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2□□□□□ -2.09
SCN4AP35499 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2□□□□□ -2.09
SCN4AP35499 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2□□□□□ -2.09
SCN4AP35499 COX6CP3-201ENST00000580869 223 ntBASIC2□□□□□ -2.09
SCN4AP35499 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2□□□□□ -2.09
SCN4AP35499 AC011451.2-201ENST00000604303 598 ntBASIC2□□□□□ -2.09
SCN4AP35499 AC012443.1-201ENST00000605605 231 ntBASIC2□□□□□ -2.09
SCN4AP35499 AC106052.1-201ENST00000608029 497 ntBASIC2□□□□□ -2.09
SCN4AP35499 AC131235.4-201ENST00000609288 620 ntBASIC2□□□□□ -2.09
SCN4AP35499 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
SCN4AP35499 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2□□□□□ -2.09
SCN4AP35499 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
SCN4AP35499 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN4AP35499 RNU6-799P-201ENST00000363567 107 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 RNU4-13P-201ENST00000364019 141 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 RNU6-723P-201ENST00000383973 107 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 RNU6-114P-201ENST00000384704 105 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SCN4AP35499 MTCO3P12-201ENST00000416718 547 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AL953862.1-201ENST00000423016 168 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN4AP35499 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN4AP35499 USP9YP15-201ENST00000442391 422 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC002381.1-201ENST00000447049 280 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN4AP35499 AC022447.3-201ENST00000506865 495 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN4AP35499 MTCO2P15-201ENST00000532655 656 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN4AP35499 AC104581.2-201ENST00000572227 430 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC010928.2-201ENST00000588017 287 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC004853.1-201ENST00000604902 698 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC023158.2-201ENST00000614876 543 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AL161629.2-201ENST00000615347 275 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC013470.4-201ENST00000619978 986 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AL445264.1-201ENST00000621719 171 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN4AP35499 AC019226.1-201ENST00000625666 515 ntBASIC1.99□□□□□ -2.09
SCN4AP35499 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.99□□□□□ -2.09
SCN4AP35499 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCN4AP35499 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.99□□□□□ -2.09
SCN4AP35499 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SCN4AP35499 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SCN4AP35499 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SCN4AP35499 SNORA1.3-201ENST00000384676 136 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 MIR320C1-201ENST00000408566 88 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 RPS24P7-201ENST00000416921 246 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AC013410.2-201ENST00000422627 201 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 SSXP4-201ENST00000451349 245 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 snoU13.28-201ENST00000459235 104 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 RPS20P20-201ENST00000460498 340 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 RPL7P18-201ENST00000478965 734 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 RNA5SP220-201ENST00000516298 104 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 OR6C7P-201ENST00000547875 934 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AL132857.1-201ENST00000555180 708 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 SNORD53B-201ENST00000577887 78 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC245884.10-201ENST00000597355 337 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AC007349.4-201ENST00000608114 532 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 DUXAP10-204ENST00000612052 616 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AL078595.3-201ENST00000623815 1166 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AP003122.6-201ENST00000623831 495 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.98□□□□□ -2.09
SCN4AP35499 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SCN4AP35499 SNORD114-26-201ENST00000363543 72 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 RNU6-60P-201ENST00000364792 103 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SCN4AP35499 RNU6-882P-201ENST00000391025 103 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN4AP35499 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN4AP35499 USP9YP26-201ENST00000421008 661 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN4AP35499 COX7BP2-201ENST00000437976 242 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 BNIP3P2-201ENST00000441221 577 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.98□□□□□ -2.09
SCN4AP35499 ATP5EP1-201ENST00000510257 156 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC090615.1-201ENST00000577519 154 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN4AP35499 AC018638.7-201ENST00000605836 1114 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN4AP35499 AL157834.3-201ENST00000615543 103 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AL031667.3-201ENST00000620124 655 ntBASIC1.98□□□□□ -2.09
SCN4AP35499 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms