Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC083906.5-201ENST00000503722 328 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AC091826.1-201ENST00000514065 313 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AC117532.1-201ENST00000514638 323 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 SCARNA13-201ENST00000516672 275 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD13P35453 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD13P35453 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD13P35453 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD13P35453 AC022080.3-201ENST00000544433 482 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AC079600.2-201ENST00000550076 130 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD13P35453 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD13P35453 AC007151.1-201ENST00000572774 483 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AC068790.2-201ENST00000602601 557 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AL627309.6-201ENST00000606857 840 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 MIR15A-201ENST00000607334 83 ntBASIC3.11□□□□□ -1.91
HOXD13P35453 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD13P35453 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD13P35453 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HOXD13P35453 Y_RNA.33-201ENST00000362591 102 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 RNU1-140P-201ENST00000365040 165 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 RNU6-395P-201ENST00000365662 106 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 USP9YP6-201ENST00000413550 854 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AL592148.1-201ENST00000413568 445 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 MTND3P17-201ENST00000416968 344 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD13P35453 RPS20P5-201ENST00000434808 360 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD13P35453 Z96811.1-201ENST00000445880 108 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 Z83846.1-201ENST00000446798 265 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC022364.2-201ENST00000457963 554 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC116562.3-201ENST00000506136 177 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD13P35453 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD13P35453 SCARNA24.1-201ENST00000516465 137 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HOXD13P35453 AP003072.2-201ENST00000527756 676 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC068587.5-201ENST00000528506 175 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD13P35453 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD13P35453 AL157871.3-201ENST00000557231 293 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC021739.1-201ENST00000559631 174 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC010546.1-201ENST00000569391 485 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC012119.1-201ENST00000603184 222 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC135507.1-201ENST00000607214 561 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 AC010338.1-201ENST00000621823 717 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD13P35453 ASNSP3-201ENST00000451989 1306 ntBASIC3.1□□□□□ -1.91
HOXD13P35453 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD13P35453 AC103710.2-202ENST00000641454 2853 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 OR5J1P-201ENST00000313544 939 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 RNU6-1097P-201ENST00000363586 107 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 SNORA51.4-201ENST00000364993 124 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HOXD13P35453 SNORA24.1-201ENST00000384401 135 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 Y_RNA.553-201ENST00000384670 102 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 SNORA26.7-201ENST00000391288 122 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 RNU6-1025P-201ENST00000410629 104 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC092809.3-201ENST00000415453 231 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC114491.1-201ENST00000416095 246 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 BX295541.1-201ENST00000417774 250 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AL139281.1-201ENST00000422120 335 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 CALM2P2-201ENST00000428512 440 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD13P35453 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD13P35453 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD13P35453 USP9YP29-201ENST00000445112 563 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 HMGN2P10-201ENST00000448085 265 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 NANOGNBP1-201ENST00000448444 480 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD13P35453 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXD13P35453 MRPS36P2-201ENST00000512569 299 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD13P35453 SNORD19.2-201ENST00000516978 73 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC090572.1-201ENST00000519251 160 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD13P35453 RANP3-201ENST00000530970 276 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD13P35453 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HOXD13P35453 AC024619.4-201ENST00000580924 316 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC093732.2-201ENST00000607950 274 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 AC012409.4-201ENST00000612923 249 ntBASIC3.09□□□□□ -1.91
HOXD13P35453 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD13P35453 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD13P35453 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD13P35453 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
HOXD13P35453 AC010889.1-201ENST00000566193 2666 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD13P35453 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HOXD13P35453 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HOXD13P35453 RPL9P7-201ENST00000330965 580 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 SNORA4.3-201ENST00000365564 137 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AL512633.1-201ENST00000399931 655 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AL122016.1-201ENST00000403365 367 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms