Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC087499.8-201ENST00000578406 226 ntBASIC3.83□□□□□ -1.8
PTPN7P35236 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN7P35236 MIR5692A1-201ENST00000580523 69 ntBASIC3.83□□□□□ -1.8
PTPN7P35236 AC002545.1-201ENST00000592511 181 ntBASIC3.83□□□□□ -1.8
PTPN7P35236 AL606490.9-201ENST00000603331 271 ntBASIC3.83□□□□□ -1.8
PTPN7P35236 AC025946.2-201ENST00000603398 234 ntBASIC3.83□□□□□ -1.8
PTPN7P35236 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN7P35236 SNRPGP17-201ENST00000603780 214 ntBASIC3.83□□□□□ -1.8
PTPN7P35236 AC002044.1-201ENST00000606707 158 ntBASIC3.83□□□□□ -1.8
PTPN7P35236 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN7P35236 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN7P35236 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN7P35236 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PTPN7P35236 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN7P35236 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN7P35236 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN7P35236 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN7P35236 RNU6-266P-201ENST00000364225 107 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN7P35236 Y_RNA.395-201ENST00000383945 109 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 Y_RNA.480-201ENST00000384364 102 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 PPIAP31-201ENST00000405422 495 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
PTPN7P35236 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN7P35236 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN7P35236 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN7P35236 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN7P35236 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 RPS20P22-201ENST00000473700 357 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 RPL31P60-201ENST00000478450 367 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN7P35236 MTND3P25-201ENST00000509243 135 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 AL359273.1-201ENST00000510918 627 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 ELOCP31-201ENST00000540463 467 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 MTCO3P13-201ENST00000577757 781 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 MIR548AC-201ENST00000585049 88 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 BNIP3P22-201ENST00000593399 556 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN7P35236 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 AC107294.1-201ENST00000609524 467 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 MIR6758-201ENST00000620653 63 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 RNA5SP196-201ENST00000625967 102 ntBASIC3.82□□□□□ -1.8
PTPN7P35236 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN7P35236 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN7P35236 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN7P35236 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN7P35236 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN7P35236 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
PTPN7P35236 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN7P35236 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN7P35236 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN7P35236 Y_RNA.187-201ENST00000363918 113 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 MIR559-201ENST00000385188 96 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 RPL23AP48-201ENST00000406913 488 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 RNU6-607P-201ENST00000411283 108 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN7P35236 BTF3L4P3-201ENST00000418879 476 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AL590632.1-201ENST00000424289 371 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 Z82205.1-201ENST00000428456 297 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN7P35236 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN7P35236 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 ELOCP24-201ENST00000456370 334 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 RPS15AP34-201ENST00000487776 387 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN7P35236 SNORA70.16-201ENST00000516390 95 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 RNU6-1256P-201ENST00000516539 103 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 RNU6-1073P-201ENST00000517182 106 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.81□□□□□ -1.8
PTPN7P35236 AC087854.1-201ENST00000519706 414 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AP006245.1-201ENST00000522549 120 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AC008011.1-201ENST00000545989 227 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.81□□□□□ -1.8
PTPN7P35236 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN7P35236 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN7P35236 LRRC37A5P-203ENST00000580181 585 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 AL590392.1-201ENST00000604960 446 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN7P35236 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN7P35236 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN7P35236 AL512643.1-201ENST00000635735 524 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN7P35236 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN7P35236 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.81□□□□□ -1.8
PTPN7P35236 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN7P35236 MTCO1P12-201ENST00000414273 1543 ntBASIC3.8□□□□□ -1.8
PTPN7P35236 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN7P35236 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN7P35236 MTND4P27-201ENST00000450813 1354 ntBASIC3.8□□□□□ -1.8
PTPN7P35236 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN7P35236 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN7P35236 RNU6-601P-201ENST00000384540 107 ntBASIC3.8□□□□□ -1.8
PTPN7P35236 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTPN7P35236 RNU2-3P-201ENST00000410144 191 ntBASIC3.8□□□□□ -1.8
PTPN7P35236 CYCSP33-201ENST00000414485 327 ntBASIC3.8□□□□□ -1.8
PTPN7P35236 AL353621.1-201ENST00000418219 243 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms