Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC091133.4-201ENST00000511142 308 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 MTND4LP26-201ENST00000518144 282 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXA13P31271 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA13P31271 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA13P31271 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA13P31271 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA13P31271 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA13P31271 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA13P31271 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA13P31271 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXA13P31271 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXA13P31271 TPRKBP2-201ENST00000565969 475 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 GLUD1P4-201ENST00000590914 418 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC104763.2-201ENST00000604179 382 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC007363.1-201ENST00000604736 620 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AP002360.4-201ENST00000606980 481 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC068944.2-201ENST00000610373 403 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC068880.5-201ENST00000624331 290 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AL160394.1-201ENST00000624765 724 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AL157786.1-207ENST00000627771 695 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 SNORA50A-202ENST00000629536 136 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA13P31271 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXA13P31271 SMIM11P1-201ENST00000369586 178 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 RNU6-140P-201ENST00000384566 108 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 Y_RNA.554-201ENST00000384672 102 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 MIR512-1-201ENST00000384913 84 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 RNU6-780P-201ENST00000391030 104 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXA13P31271 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXA13P31271 RPL21P8-201ENST00000465083 535 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 UBE2DNL-203ENST00000474922 222 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AC105252.1-201ENST00000503089 286 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.2□□□□□ -1.9
HOXA13P31271 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXA13P31271 RNU6-143P-201ENST00000516942 93 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 RNA5SP471-201ENST00000516971 106 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXA13P31271 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXA13P31271 AC098826.3-201ENST00000603823 466 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AC006023.1-201ENST00000603944 259 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 Z84480.1-201ENST00000605131 311 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AL158032.1-201ENST00000605401 106 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AC099778.2-201ENST00000610904 211 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AC034102.8-201ENST00000615146 484 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 AC138649.3-201ENST00000622154 254 ntBASIC3.2□□□□□ -1.9
HOXA13P31271 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HOXA13P31271 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXA13P31271 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HOXA13P31271 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXA13P31271 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXA13P31271 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 RNU6-946P-201ENST00000383878 107 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 RNU6-1035P-201ENST00000384477 107 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HOXA13P31271 AL138827.1-201ENST00000402666 306 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 RNU2-39P-201ENST00000410604 198 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 RNU2-52P-201ENST00000410680 190 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA13P31271 ZNF90P2-204ENST00000419323 1075 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXA13P31271 AL451074.3-201ENST00000437709 472 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 BNIP3P2-201ENST00000441221 577 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AC087588.1-201ENST00000462203 316 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA13P31271 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA13P31271 RNU6-677P-201ENST00000516914 101 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA13P31271 RPS3AP4-201ENST00000555161 764 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA13P31271 AL391840.1-201ENST00000571144 367 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 MTCO3P24-201ENST00000572729 782 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AC098848.2-201ENST00000588023 330 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA13P31271 AC092794.1-201ENST00000612734 582 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 AL138880.2-201ENST00000616214 239 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HOXA13P31271 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA13P31271 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA13P31271 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.19□□□□□ -1.9
HOXA13P31271 CR848007.1-201ENST00000442354 1699 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 Y_RNA.6-201ENST00000362350 114 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 RNU6-960P-201ENST00000364056 120 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 RNU6-169P-201ENST00000365336 107 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA13P31271 RNU6-190P-201ENST00000384154 102 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 RNU6-456P-201ENST00000384493 107 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 FCF1P9-201ENST00000412546 282 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 MRPL50P2-201ENST00000416821 482 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 PIGFP2-201ENST00000421400 651 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AL139281.1-201ENST00000422120 335 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms