Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 RNU6-390P-201ENST00000516259 103 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 MTCO2P15-201ENST00000532655 656 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 AC027176.1-201ENST00000560204 514 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 MIR544B-201ENST00000582372 78 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 RPP40P2-201ENST00000603596 712 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 AC005034.5-201ENST00000604219 466 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DMAP28067 BCRP9-201ENST00000605312 388 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 MIR7106-201ENST00000612419 65 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 AC024581.2-201ENST00000619986 252 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 PCMTD1P7-201ENST00000634506 357 ntBASIC1.8□□□□□ -2.12
HLA-DMAP28067 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DMAP28067 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC103710.2-202ENST00000641454 2853 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC062016.1-201ENST00000355719 319 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 RNU6-462P-201ENST00000362659 105 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DMAP28067 RNU6-157P-201ENST00000383957 107 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 RNU6-925P-201ENST00000384629 104 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AL359704.1-201ENST00000411586 781 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC083875.1-201ENST00000419509 405 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 SKA2P1-201ENST00000425592 390 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 RPL23AP83-201ENST00000434984 473 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AL136380.1-201ENST00000447970 162 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 RPS3P1-201ENST00000456781 192 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 PMCHL2-203ENST00000457791 237 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 RNA5SP112-201ENST00000515937 99 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 RNA5SP200-201ENST00000516360 103 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 HMGN1P28-201ENST00000521340 364 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC004805.2-201ENST00000605382 482 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AL391813.2-201ENST00000609113 322 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC097478.2-201ENST00000610572 514 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC135507.2-201ENST00000612443 309 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC005296.1-201ENST00000616145 209 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AP000676.3-201ENST00000623299 569 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DMAP28067 AL354685.2-201ENST00000448218 1447 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 AC106754.1-201ENST00000562632 1513 ntBASIC1.79□□□□□ -2.12
HLA-DMAP28067 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DMAP28067 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC092125.1-201ENST00000562568 1995 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AL359854.1-201ENST00000614203 1594 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DMAP28067 RNU6-1159P-201ENST00000362933 107 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 MIR483-201ENST00000385070 76 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 U8.14-201ENST00000390843 143 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 RN7SKP266-201ENST00000410232 287 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 RPL21P24-201ENST00000413752 448 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC106883.1-201ENST00000418805 562 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 SNRPEP9-201ENST00000436794 238 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 FABP5P14-201ENST00000437273 393 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DMAP28067 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC108938.1-201ENST00000451204 136 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC008481.1-201ENST00000463278 396 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 RN7SL432P-201ENST00000484057 298 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC055855.1-201ENST00000489563 579 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC093809.1-201ENST00000509155 340 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 MRPS33P3-201ENST00000513456 322 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC136618.2-201ENST00000575091 400 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 BNIP3P22-201ENST00000593399 556 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AL592221.1-201ENST00000605266 382 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC013244.3-201ENST00000605614 388 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms