Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC098799.2-201ENST00000509466 868 ntBASIC2.92□□□□□ -1.94
CDH3P22223 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH3P22223 RNU6-445P-201ENST00000516949 107 ntBASIC2.92□□□□□ -1.94
CDH3P22223 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH3P22223 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH3P22223 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH3P22223 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH3P22223 AC011471.1-201ENST00000585766 187 ntBASIC2.92□□□□□ -1.94
CDH3P22223 AC002545.1-201ENST00000592511 181 ntBASIC2.92□□□□□ -1.94
CDH3P22223 AC008739.2-201ENST00000597006 317 ntBASIC2.92□□□□□ -1.94
CDH3P22223 AC007363.1-201ENST00000604736 620 ntBASIC2.92□□□□□ -1.94
CDH3P22223 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.92□□□□□ -1.94
CDH3P22223 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH3P22223 AC015540.1-201ENST00000615828 501 ntBASIC2.92□□□□□ -1.94
CDH3P22223 AL589994.2-201ENST00000621124 579 ntBASIC2.92□□□□□ -1.94
CDH3P22223 MTND1P37-201ENST00000636562 264 ntBASIC2.92□□□□□ -1.94
CDH3P22223 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CDH3P22223 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDH3P22223 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.92□□□□□ -1.94
CDH3P22223 FAM35BP-202ENST00000497389 3337 ntBASIC2.92□□□□□ -1.94
CDH3P22223 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH3P22223 RN7SKP226-201ENST00000364912 300 ntBASIC2.91□□□□□ -1.94
CDH3P22223 RNU6-1180P-201ENST00000364935 107 ntBASIC2.91□□□□□ -1.94
CDH3P22223 RNU6-741P-201ENST00000383889 107 ntBASIC2.91□□□□□ -1.94
CDH3P22223 RNU5A-6P-201ENST00000384136 116 ntBASIC2.91□□□□□ -1.94
CDH3P22223 MIR181B1-201ENST00000385240 110 ntBASIC2.91□□□□□ -1.94
CDH3P22223 RNU2-33P-201ENST00000410344 192 ntBASIC2.91□□□□□ -1.94
CDH3P22223 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH3P22223 MED13P1-201ENST00000428342 171 ntBASIC2.91□□□□□ -1.94
CDH3P22223 AC132479.1-201ENST00000449160 144 ntBASIC2.91□□□□□ -1.94
CDH3P22223 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CDH3P22223 AC108078.1-201ENST00000508073 725 ntBASIC2.91□□□□□ -1.94
CDH3P22223 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.91□□□□□ -1.94
CDH3P22223 OR5G4P-201ENST00000525251 760 ntBASIC2.91□□□□□ -1.94
CDH3P22223 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH3P22223 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH3P22223 AC010546.1-201ENST00000569391 485 ntBASIC2.91□□□□□ -1.94
CDH3P22223 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.91□□□□□ -1.94
CDH3P22223 AL137843.1-201ENST00000605078 385 ntBASIC2.91□□□□□ -1.94
CDH3P22223 AL121992.2-201ENST00000606262 256 ntBASIC2.91□□□□□ -1.94
CDH3P22223 AC093732.2-201ENST00000607950 274 ntBASIC2.91□□□□□ -1.94
CDH3P22223 AC087241.4-201ENST00000612441 480 ntBASIC2.91□□□□□ -1.94
CDH3P22223 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.91□□□□□ -1.94
CDH3P22223 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH3P22223 AC027309.3-201ENST00000623419 351 ntBASIC2.91□□□□□ -1.94
CDH3P22223 FRG1KP-201ENST00000623592 341 ntBASIC2.91□□□□□ -1.94
CDH3P22223 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH3P22223 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH3P22223 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH3P22223 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CDH3P22223 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CDH3P22223 AL137003.2-201ENST00000606924 2538 ntBASIC2.9□□□□□ -1.94
CDH3P22223 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CDH3P22223 RNU6-108P-201ENST00000365558 107 ntBASIC2.9□□□□□ -1.95
CDH3P22223 RNU6-946P-201ENST00000383878 107 ntBASIC2.9□□□□□ -1.95
CDH3P22223 SNORA44-201ENST00000384584 132 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH3P22223 COTL1P1-201ENST00000422309 375 ntBASIC2.9□□□□□ -1.95
CDH3P22223 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH3P22223 AC007919.1-201ENST00000429380 217 ntBASIC2.9□□□□□ -1.95
CDH3P22223 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH3P22223 GPR143P-201ENST00000434155 205 ntBASIC2.9□□□□□ -1.95
CDH3P22223 RPS15AP9-201ENST00000439856 381 ntBASIC2.9□□□□□ -1.95
CDH3P22223 BNIP3P2-201ENST00000441221 577 ntBASIC2.9□□□□□ -1.95
CDH3P22223 NEFMP1-201ENST00000443423 1006 ntBASIC2.9□□□□□ -1.95
CDH3P22223 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH3P22223 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH3P22223 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH3P22223 AC013267.1-201ENST00000458227 267 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AC087588.1-201ENST00000462203 316 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AC008571.1-201ENST00000467232 300 ntBASIC2.9□□□□□ -1.95
CDH3P22223 RPS3AP17-201ENST00000472594 777 ntBASIC2.9□□□□□ -1.95
CDH3P22223 RPS3AP14-201ENST00000483907 780 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AC007182.2-201ENST00000489251 402 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH3P22223 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.9□□□□□ -1.95
CDH3P22223 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH3P22223 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH3P22223 HMGB1P14-201ENST00000557424 591 ntBASIC2.9□□□□□ -1.95
CDH3P22223 TRAV28-201ENST00000557548 323 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH3P22223 AC106782.4-201ENST00000568264 210 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH3P22223 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDH3P22223 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.9□□□□□ -1.95
CDH3P22223 AC138649.3-201ENST00000622154 254 ntBASIC2.9□□□□□ -1.95
CDH3P22223 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH3P22223 AC006386.2-201ENST00000624491 75 ntBASIC2.9□□□□□ -1.95
CDH3P22223 AC012005.1-201ENST00000624575 75 ntBASIC2.9□□□□□ -1.95
CDH3P22223 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH3P22223 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.9□□□□□ -1.95
CDH3P22223 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH3P22223 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CDH3P22223 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CDH3P22223 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH3P22223 AC010680.1-201ENST00000590024 3590 ntBASIC2.9□□□□□ -1.95
CDH3P22223 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CDH3P22223 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
CDH3P22223 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDH3P22223 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms