Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC3P19447 RPL7P50-201ENST00000600588 727 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 AL121917.1-203ENST00000605534 577 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 AL157817.1-201ENST00000614264 790 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 AC073308.1-201ENST00000623696 305 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 AL669831.3-213ENST00000636676 183 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC3P19447 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC3P19447 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC3P19447 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC3P19447 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC3P19447 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC3P19447 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
ERCC3P19447 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.87□□□□□ -1.63
ERCC3P19447 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ERCC3P19447 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC3P19447 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC3P19447 RNU6-1227P-201ENST00000383981 107 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 RNU6-217P-201ENST00000384164 104 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 RNA5SP171-201ENST00000391071 115 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 RPS4XP3-201ENST00000398541 413 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
ERCC3P19447 CYCSP19-201ENST00000411715 316 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 Z82205.1-201ENST00000428456 297 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC3P19447 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC3P19447 HIGD1AP11-201ENST00000438361 280 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 NDUFB1P2-201ENST00000449477 176 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 HMGB3P8-201ENST00000449709 577 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AC034236.1-201ENST00000469891 373 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC3P19447 HMGN1P11-201ENST00000508668 303 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AC005741.1-201ENST00000511094 432 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 Y_RNA.708-201ENST00000516950 96 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC3P19447 IGLV3-26-201ENST00000520756 302 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
ERCC3P19447 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ERCC3P19447 H3F3AP1-201ENST00000559984 334 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC3P19447 AL355598.1-201ENST00000604169 202 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AC008962.1-201ENST00000605729 304 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AC009229.3-201ENST00000608056 282 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AL161423.1-201ENST00000613700 262 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AC002076.2-201ENST00000617362 122 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ERCC3P19447 AC244517.12-201ENST00000623581 663 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC3P19447 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC3P19447 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ERCC3P19447 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ERCC3P19447 MTCO1P12-201ENST00000414273 1543 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.87□□□□□ -1.63
ERCC3P19447 KPNA2P1-201ENST00000458289 1591 ntBASIC4.87□□□□□ -1.63
ERCC3P19447 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.86□□□□□ -1.63
ERCC3P19447 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.86□□□□□ -1.63
ERCC3P19447 Y_RNA.2-201ENST00000362330 96 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 SNORD74.4-201ENST00000364129 80 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 MIR517A-201ENST00000385001 87 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 AL590004.1-201ENST00000405321 300 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 RNU6-1050P-201ENST00000410388 107 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 RNU6-954P-201ENST00000411355 107 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 AC236972.1-201ENST00000433225 199 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 RPL23AP50-201ENST00000434149 455 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 RPS29P7-201ENST00000439662 171 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 RPL37P4-201ENST00000448908 268 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 PCMTD1P1-201ENST00000455560 355 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.86□□□□□ -1.63
ERCC3P19447 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.86□□□□□ -1.63
ERCC3P19447 AP003072.1-201ENST00000531740 145 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.86□□□□□ -1.63
ERCC3P19447 AL160281.1-201ENST00000605307 311 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 AC124303.1-201ENST00000605703 360 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 MTND4P27-201ENST00000450813 1354 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 AC007496.3-201ENST00000624987 3443 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ERCC3P19447 AC118273.1-201ENST00000525324 3006 ntBASIC4.86□□□□□ -1.63
ERCC3P19447 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC3P19447 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC3P19447 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC3P19447 OTUD4P1-201ENST00000237841 3067 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
ERCC3P19447 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ERCC3P19447 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC3P19447 RNU1-44P-201ENST00000384453 163 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ERCC3P19447 RPL5P18-201ENST00000406671 891 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 AL096701.2-201ENST00000416920 238 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 AF228730.4-201ENST00000421457 183 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 MTCO3P10-201ENST00000455912 772 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.85□□□□□ -1.63
ERCC3P19447 RPL7P42-201ENST00000481005 679 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.85□□□□□ -1.63
ERCC3P19447 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.85□□□□□ -1.63
ERCC3P19447 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.85□□□□□ -1.63
ERCC3P19447 AL163153.1-201ENST00000554223 283 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 RPL23AP97-201ENST00000568955 471 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 MTND4LP5-201ENST00000605152 292 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
ERCC3P19447 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms