Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC119674.1-207ENST00000641355 633 ntBASIC4.12□□□□□ -1.75
ATF4P18848 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 ZFRP1-201ENST00000457579 2970 ntBASIC4.12□□□□□ -1.75
ATF4P18848 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATF4P18848 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
ATF4P18848 UBE3AP2-201ENST00000429033 2259 ntBASIC4.11□□□□□ -1.75
ATF4P18848 AC032011.1-201ENST00000611703 1549 ntBASIC4.11□□□□□ -1.75
ATF4P18848 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATF4P18848 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATF4P18848 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATF4P18848 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATF4P18848 RNU6-595P-201ENST00000363944 107 ntBASIC4.11□□□□□ -1.75
ATF4P18848 MIR1286-201ENST00000408112 78 ntBASIC4.11□□□□□ -1.75
ATF4P18848 RNA5SP44-201ENST00000410446 133 ntBASIC4.11□□□□□ -1.75
ATF4P18848 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.11□□□□□ -1.75
ATF4P18848 MTCYBP10-201ENST00000424905 650 ntBASIC4.11□□□□□ -1.75
ATF4P18848 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.11□□□□□ -1.75
ATF4P18848 AC097462.2-201ENST00000504623 481 ntBASIC4.11□□□□□ -1.75
ATF4P18848 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.11□□□□□ -1.75
ATF4P18848 ACA59.2-201ENST00000517061 156 ntBASIC4.11□□□□□ -1.75
ATF4P18848 EDDM3DP-201ENST00000554692 434 ntBASIC4.11□□□□□ -1.75
ATF4P18848 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.11□□□□□ -1.75
ATF4P18848 MIR4474-201ENST00000579189 78 ntBASIC4.11□□□□□ -1.75
ATF4P18848 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.11□□□□□ -1.75
ATF4P18848 AL158827.2-201ENST00000602494 330 ntBASIC4.11□□□□□ -1.75
ATF4P18848 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.11□□□□□ -1.75
ATF4P18848 AL138825.1-201ENST00000618587 192 ntBASIC4.11□□□□□ -1.75
ATF4P18848 AL691447.3-201ENST00000635020 330 ntBASIC4.11□□□□□ -1.75
ATF4P18848 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.11□□□□□ -1.75
ATF4P18848 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATF4P18848 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
ATF4P18848 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.11□□□□□ -1.75
ATF4P18848 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATF4P18848 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATF4P18848 RN7SKP95-201ENST00000362860 303 ntBASIC4.1□□□□□ -1.75
ATF4P18848 SNORD50.1-201ENST00000362987 71 ntBASIC4.1□□□□□ -1.75
ATF4P18848 Y_RNA.80-201ENST00000362996 102 ntBASIC4.1□□□□□ -1.75
ATF4P18848 Y_RNA.459-201ENST00000384251 102 ntBASIC4.1□□□□□ -1.75
ATF4P18848 Y_RNA.496-201ENST00000384444 101 ntBASIC4.1□□□□□ -1.75
ATF4P18848 MIR513A2-201ENST00000385249 127 ntBASIC4.1□□□□□ -1.75
ATF4P18848 RNA5SP252-201ENST00000391131 119 ntBASIC4.1□□□□□ -1.75
ATF4P18848 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.1□□□□□ -1.75
ATF4P18848 AL138885.1-201ENST00000405921 675 ntBASIC4.1□□□□□ -1.75
ATF4P18848 RNU2-23P-201ENST00000410545 195 ntBASIC4.1□□□□□ -1.75
ATF4P18848 BX510359.2-201ENST00000417920 305 ntBASIC4.1□□□□□ -1.75
ATF4P18848 EIF1AXP1-201ENST00000419267 435 ntBASIC4.1□□□□□ -1.75
ATF4P18848 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.1□□□□□ -1.75
ATF4P18848 GSTM5P1-201ENST00000434751 660 ntBASIC4.1□□□□□ -1.75
ATF4P18848 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.1□□□□□ -1.75
ATF4P18848 AC243964.1-201ENST00000441814 261 ntBASIC4.1□□□□□ -1.75
ATF4P18848 EEF1B2P6-201ENST00000445713 673 ntBASIC4.1□□□□□ -1.75
ATF4P18848 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.1□□□□□ -1.75
ATF4P18848 RN7SKP210-201ENST00000459176 261 ntBASIC4.1□□□□□ -1.75
ATF4P18848 AC107626.1-201ENST00000471084 183 ntBASIC4.1□□□□□ -1.75
ATF4P18848 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.1□□□□□ -1.75
ATF4P18848 AL592156.1-201ENST00000508758 304 ntBASIC4.1□□□□□ -1.75
ATF4P18848 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.1□□□□□ -1.75
ATF4P18848 AC093840.1-201ENST00000511599 336 ntBASIC4.1□□□□□ -1.75
ATF4P18848 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 AC144568.1-201ENST00000520139 137 ntBASIC4.1□□□□□ -1.75
ATF4P18848 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.1□□□□□ -1.75
ATF4P18848 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.1□□□□□ -1.75
ATF4P18848 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.1□□□□□ -1.75
ATF4P18848 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.1□□□□□ -1.75
ATF4P18848 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.1□□□□□ -1.75
ATF4P18848 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.1□□□□□ -1.75
ATF4P18848 AL591034.3-201ENST00000605511 685 ntBASIC4.1□□□□□ -1.75
ATF4P18848 SDR42E1P1-201ENST00000611327 477 ntBASIC4.1□□□□□ -1.75
ATF4P18848 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.1□□□□□ -1.75
ATF4P18848 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ATF4P18848 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATF4P18848 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATF4P18848 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATF4P18848 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATF4P18848 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATF4P18848 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ATF4P18848 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATF4P18848 OR5P1P-201ENST00000299512 925 ntBASIC4.09□□□□□ -1.75
ATF4P18848 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ATF4P18848 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.09□□□□□ -1.75
ATF4P18848 RNU6-19P-201ENST00000384718 107 ntBASIC4.09□□□□□ -1.75
ATF4P18848 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.09□□□□□ -1.75
ATF4P18848 OR2AM1P-201ENST00000422137 422 ntBASIC4.09□□□□□ -1.75
ATF4P18848 MRPS18CP6-201ENST00000423587 223 ntBASIC4.09□□□□□ -1.75
ATF4P18848 RPS11P7-201ENST00000442125 465 ntBASIC4.09□□□□□ -1.75
ATF4P18848 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ATF4P18848 AC105758.1-201ENST00000506038 399 ntBASIC4.09□□□□□ -1.75
ATF4P18848 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.09□□□□□ -1.75
ATF4P18848 PPBPP1-201ENST00000510807 373 ntBASIC4.09□□□□□ -1.75
ATF4P18848 SNORA31.21-201ENST00000517180 77 ntBASIC4.09□□□□□ -1.75
ATF4P18848 RPL23AP53-201ENST00000521854 457 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms