Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.29□□□□□ -2.36
VCANP13611 RNA5SP361-201ENST00000362686 118 ntBASIC0.29□□□□□ -2.36
VCANP13611 AL356432.1-201ENST00000405809 419 ntBASIC0.29□□□□□ -2.36
VCANP13611 MTND3P24-201ENST00000506306 329 ntBASIC0.29□□□□□ -2.36
VCANP13611 AC112206.3-201ENST00000514578 389 ntBASIC0.29□□□□□ -2.36
VCANP13611 AC000123.2-201ENST00000623124 461 ntBASIC0.29□□□□□ -2.36
VCANP13611 SNORD3E-201ENST00000362899 217 ntBASIC0.29□□□□□ -2.36
VCANP13611 SNORD49B-201ENST00000365172 72 ntBASIC0.29□□□□□ -2.36
VCANP13611 MIR10B-201ENST00000385011 110 ntBASIC0.29□□□□□ -2.36
VCANP13611 RPL22P13-201ENST00000493291 347 ntBASIC0.29□□□□□ -2.36
VCANP13611 RPL23AP54-201ENST00000495129 419 ntBASIC0.29□□□□□ -2.36
VCANP13611 AC026371.1-201ENST00000551867 419 ntBASIC0.29□□□□□ -2.36
VCANP13611 AC006249.1-201ENST00000621223 471 ntBASIC0.29□□□□□ -2.36
VCANP13611 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.29□□□□□ -2.36
VCANP13611 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.29□□□□□ -2.36
VCANP13611 RNU6-989P-201ENST00000362756 107 ntBASIC0.28□□□□□ -2.36
VCANP13611 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
VCANP13611 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
VCANP13611 CIR1P3-201ENST00000405137 479 ntBASIC0.28□□□□□ -2.36
VCANP13611 SNORD59.2-201ENST00000516873 68 ntBASIC0.28□□□□□ -2.36
VCANP13611 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.28□□□□□ -2.36
VCANP13611 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.28□□□□□ -2.36
VCANP13611 AC006518.2-201ENST00000542513 940 ntBASIC0.28□□□□□ -2.36
VCANP13611 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.28□□□□□ -2.36
VCANP13611 FAM60CP-201ENST00000591086 664 ntBASIC0.28□□□□□ -2.36
VCANP13611 AC008163.1-202ENST00000636004 2889 ntBASIC0.28□□□□□ -2.37
VCANP13611 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.28□□□□□ -2.37
VCANP13611 OR2A41P-201ENST00000473586 105 ntBASIC0.28□□□□□ -2.37
VCANP13611 MIR676-201ENST00000390702 67 ntBASIC0.27□□□□□ -2.37
VCANP13611 TOMM22P2-201ENST00000430735 237 ntBASIC0.27□□□□□ -2.37
VCANP13611 AC139453.3-201ENST00000493276 369 ntBASIC0.27□□□□□ -2.37
VCANP13611 RNU6-322P-201ENST00000516010 103 ntBASIC0.27□□□□□ -2.37
VCANP13611 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.27□□□□□ -2.37
VCANP13611 MIR4305-201ENST00000583252 102 ntBASIC0.27□□□□□ -2.37
VCANP13611 AC090425.2-201ENST00000608818 501 ntBASIC0.27□□□□□ -2.37
VCANP13611 AP001350.1-201ENST00000601906 1524 ntBASIC0.27□□□□□ -2.37
VCANP13611 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.27□□□□□ -2.37
VCANP13611 SNORA8-201ENST00000384574 139 ntBASIC0.27□□□□□ -2.37
VCANP13611 AP002784.2-201ENST00000397300 549 ntBASIC0.27□□□□□ -2.37
VCANP13611 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
VCANP13611 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.27□□□□□ -2.37
VCANP13611 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.27□□□□□ -2.37
VCANP13611 HMGB1P46-201ENST00000520062 610 ntBASIC0.27□□□□□ -2.37
VCANP13611 FAM157B-203ENST00000639350 358 ntBASIC0.27□□□□□ -2.37
VCANP13611 RNU6-833P-201ENST00000363486 107 ntBASIC0.26□□□□□ -2.37
VCANP13611 RNU6-939P-201ENST00000384634 107 ntBASIC0.26□□□□□ -2.37
VCANP13611 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
VCANP13611 Y_RNA.583-201ENST00000391033 113 ntBASIC0.26□□□□□ -2.37
VCANP13611 HMGN2P22-201ENST00000427588 175 ntBASIC0.26□□□□□ -2.37
VCANP13611 HMGN2P13-201ENST00000476476 274 ntBASIC0.26□□□□□ -2.37
VCANP13611 AC138853.1-201ENST00000503549 823 ntBASIC0.26□□□□□ -2.37
VCANP13611 AC025465.4-201ENST00000513422 638 ntBASIC0.26□□□□□ -2.37
VCANP13611 AC107214.2-201ENST00000608204 634 ntBASIC0.26□□□□□ -2.37
VCANP13611 uc_338.6-201ENST00000613544 171 ntBASIC0.26□□□□□ -2.37
VCANP13611 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.26□□□□□ -2.37
VCANP13611 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.26□□□□□ -2.37
VCANP13611 RNU6-19P-201ENST00000384718 107 ntBASIC0.26□□□□□ -2.37
VCANP13611 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.26□□□□□ -2.37
VCANP13611 AL161449.1-201ENST00000414531 1199 ntBASIC0.26□□□□□ -2.37
VCANP13611 XKRYP1-201ENST00000423438 492 ntBASIC0.26□□□□□ -2.37
VCANP13611 AL035410.1-201ENST00000427409 427 ntBASIC0.26□□□□□ -2.37
VCANP13611 XKRYP2-201ENST00000432915 492 ntBASIC0.26□□□□□ -2.37
VCANP13611 LSM6P2-201ENST00000552208 177 ntBASIC0.26□□□□□ -2.37
VCANP13611 RNA5SP252-201ENST00000391131 119 ntBASIC0.26□□□□□ -2.37
VCANP13611 RAB9AP5-201ENST00000437794 597 ntBASIC0.26□□□□□ -2.37
VCANP13611 PRPS1P1-201ENST00000445305 876 ntBASIC0.26□□□□□ -2.37
VCANP13611 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
VCANP13611 AC141557.1-201ENST00000540982 400 ntBASIC0.26□□□□□ -2.37
VCANP13611 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC0.26□□□□□ -2.37
VCANP13611 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
VCANP13611 FRG1HP-204ENST00000617940 757 ntBASIC0.26□□□□□ -2.37
VCANP13611 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
VCANP13611 ZNF29P-201ENST00000225587 168 ntBASIC0.25□□□□□ -2.37
VCANP13611 PIGPP2-201ENST00000411569 458 ntBASIC0.25□□□□□ -2.37
VCANP13611 AL606490.4-201ENST00000423117 127 ntBASIC0.25□□□□□ -2.37
VCANP13611 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.25□□□□□ -2.37
VCANP13611 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.25□□□□□ -2.37
VCANP13611 RPEP5-201ENST00000441137 268 ntBASIC0.25□□□□□ -2.37
VCANP13611 AC134050.1-201ENST00000495088 933 ntBASIC0.25□□□□□ -2.37
VCANP13611 AC073410.2-201ENST00000603240 332 ntBASIC0.25□□□□□ -2.37
VCANP13611 RNU6-1180P-201ENST00000364935 107 ntBASIC0.25□□□□□ -2.37
VCANP13611 SNORA50A-201ENST00000384225 134 ntBASIC0.25□□□□□ -2.37
VCANP13611 AC025768.1-201ENST00000510057 267 ntBASIC0.25□□□□□ -2.37
VCANP13611 IGKV1-22-201ENST00000524313 326 ntBASIC0.25□□□□□ -2.37
VCANP13611 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.25□□□□□ -2.37
VCANP13611 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.25□□□□□ -2.37
VCANP13611 AL627230.6-201ENST00000611129 280 ntBASIC0.25□□□□□ -2.37
VCANP13611 AC016590.3-201ENST00000611171 753 ntBASIC0.25□□□□□ -2.37
VCANP13611 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.25□□□□□ -2.37
VCANP13611 SNORD115-41-201ENST00000363608 82 ntBASIC0.25□□□□□ -2.37
VCANP13611 AL356131.1-201ENST00000405826 414 ntBASIC0.25□□□□□ -2.37
VCANP13611 DYNLT3P2-201ENST00000442517 295 ntBASIC0.25□□□□□ -2.37
VCANP13611 VN1R81P-201ENST00000602085 372 ntBASIC0.25□□□□□ -2.37
VCANP13611 RNU4-32P-201ENST00000363404 141 ntBASIC0.24□□□□□ -2.37
VCANP13611 U3.8-201ENST00000363675 217 ntBASIC0.24□□□□□ -2.37
VCANP13611 AC027575.1-201ENST00000481064 460 ntBASIC0.24□□□□□ -2.37
VCANP13611 AC021146.2-201ENST00000504736 556 ntBASIC0.24□□□□□ -2.37
VCANP13611 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.24□□□□□ -2.37
VCANP13611 AC112487.2-201ENST00000637950 304 ntBASIC0.24□□□□□ -2.37
VCANP13611 Y_RNA.65-201ENST00000362846 100 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms