Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNA5SP63-201ENST00000391225 112 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.65□□□□□ -2.31
TOP2AP11388 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.65□□□□□ -2.31
TOP2AP11388 RPL9P9-202ENST00000466501 579 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 AC134050.1-201ENST00000495088 933 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 RNU4-57P-201ENST00000515980 135 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 SNORA62.5-201ENST00000516634 120 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 RNA5SP337-201ENST00000517007 109 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 AC025588.4-201ENST00000615802 908 ntBASIC0.65□□□□□ -2.31
TOP2AP11388 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.65□□□□□ -2.31
TOP2AP11388 AC000111.3-201ENST00000433478 193 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.64□□□□□ -2.31
TOP2AP11388 AL035666.1-201ENST00000446195 348 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 RNU6-775P-201ENST00000459318 96 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 AC008379.1-201ENST00000463655 464 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.64□□□□□ -2.31
TOP2AP11388 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.64□□□□□ -2.31
TOP2AP11388 SNORA63.3-201ENST00000362682 132 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 RNU4-67P-201ENST00000364569 141 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.64□□□□□ -2.31
TOP2AP11388 TMEM167AP1-201ENST00000423409 219 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.64□□□□□ -2.31
TOP2AP11388 HAR1A.1-201ENST00000459583 118 ntBASIC0.64□□□□□ -2.31
TOP2AP11388 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.64□□□□□ -2.31
TOP2AP11388 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.64□□□□□ -2.31
TOP2AP11388 MTND4P12-201ENST00000498999 1377 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 Y_RNA.280-201ENST00000364765 112 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 Y_RNA.412-201ENST00000384001 104 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 SNORA50A-201ENST00000384225 134 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 AL356320.2-201ENST00000417263 507 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 AL591704.1-201ENST00000432574 275 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 AL157398.1-201ENST00000452981 186 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 AC015908.1-201ENST00000478739 476 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.63□□□□□ -2.31
TOP2AP11388 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
TOP2AP11388 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.63□□□□□ -2.31
TOP2AP11388 AC011260.1-201ENST00000578420 472 ntBASIC0.63□□□□□ -2.31
TOP2AP11388 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
TOP2AP11388 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TOP2AP11388 RNU6-185P-201ENST00000384421 107 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 RPS4XP3-201ENST00000398541 413 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.62□□□□□ -2.31
TOP2AP11388 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 ARL5AP2-201ENST00000444698 533 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 RPL31P20-201ENST00000449593 360 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 PRELID3BP1-201ENST00000457142 540 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 MIR4713-201ENST00000582691 75 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 AC021171.1-201ENST00000603137 706 ntBASIC0.62□□□□□ -2.31
TOP2AP11388 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.61□□□□□ -2.31
TOP2AP11388 RPL23AP35-201ENST00000451906 501 ntBASIC0.61□□□□□ -2.31
TOP2AP11388 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.61□□□□□ -2.31
TOP2AP11388 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.61□□□□□ -2.31
TOP2AP11388 AC006518.2-201ENST00000542513 940 ntBASIC0.61□□□□□ -2.31
TOP2AP11388 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TOP2AP11388 RNU1-105P-201ENST00000363470 161 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 Y_RNA.294-201ENST00000364916 102 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.6□□□□□ -2.31
TOP2AP11388 FTH1P12-201ENST00000432137 551 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 MTND5P8-201ENST00000449817 1083 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.6□□□□□ -2.31
TOP2AP11388 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.6□□□□□ -2.31
TOP2AP11388 AL355472.4-201ENST00000610233 626 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 AC079395.3-201ENST00000615161 484 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 MIR6718-201ENST00000616153 80 ntBASIC0.6□□□□□ -2.31
TOP2AP11388 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TOP2AP11388 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TOP2AP11388 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.59□□□□□ -2.31
TOP2AP11388 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.59□□□□□ -2.31
TOP2AP11388 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.59□□□□□ -2.31
TOP2AP11388 AC009974.1-201ENST00000608881 455 ntBASIC0.59□□□□□ -2.31
TOP2AP11388 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.59□□□□□ -2.31
TOP2AP11388 MIR4496-201ENST00000635896 61 ntBASIC0.59□□□□□ -2.31
TOP2AP11388 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
TOP2AP11388 RNU6-418P-201ENST00000384035 107 ntBASIC0.59□□□□□ -2.32
TOP2AP11388 USP9YP33-201ENST00000412220 421 ntBASIC0.59□□□□□ -2.32
TOP2AP11388 USP9YP35-201ENST00000435696 412 ntBASIC0.59□□□□□ -2.32
TOP2AP11388 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.59□□□□□ -2.32
TOP2AP11388 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.59□□□□□ -2.32
TOP2AP11388 AC136932.1-201ENST00000574771 208 ntBASIC0.59□□□□□ -2.32
TOP2AP11388 AC010620.1-201ENST00000601088 1102 ntBASIC0.59□□□□□ -2.32
TOP2AP11388 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 U3.8-201ENST00000363675 217 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 RNU1-96P-201ENST00000364163 162 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 MIR10B-201ENST00000385011 110 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 U3.20-201ENST00000390909 217 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 RN7SKP158-201ENST00000410453 326 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 AC013410.2-201ENST00000422627 201 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 AL035410.1-201ENST00000427409 427 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 AC093677.1-201ENST00000514414 678 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 MIR5571-201ENST00000577998 113 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 AC084824.5-201ENST00000612009 413 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.58□□□□□ -2.32
TOP2AP11388 AC123912.3-201ENST00000600907 1367 ntBASIC0.57□□□□□ -2.32
TOP2AP11388 RNU1-36P-201ENST00000365130 165 ntBASIC0.57□□□□□ -2.32
TOP2AP11388 RNU6-272P-201ENST00000411028 104 ntBASIC0.57□□□□□ -2.32
TOP2AP11388 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms