Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC004792.1-201ENST00000614523 137 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AC034102.8-201ENST00000615146 484 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AL360181.4-201ENST00000621752 134 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AC007546.2-201ENST00000623996 360 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 DHX9P1-201ENST00000436565 3076 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-212P-201ENST00000362642 104 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.151-201ENST00000363566 112 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.274-201ENST00000364714 101 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.291-201ENST00000364886 113 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-45P-201ENST00000384471 107 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 LAP3P1-201ENST00000403648 294 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 BX276092.3-201ENST00000424182 230 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AL606753.1-201ENST00000427435 87 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AL353997.1-201ENST00000432936 108 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 OR2AQ1P-201ENST00000451972 200 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 snoU13.24-201ENST00000458998 104 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 RPL21P41-201ENST00000459863 264 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC084198.1-201ENST00000477747 402 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC026784.1-201ENST00000507986 352 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-513P-201ENST00000516104 104 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-914P-201ENST00000516749 109 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC022968.1-201ENST00000567372 442 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 MIR3944-201ENST00000581277 108 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 MIR3133-201ENST00000583157 78 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC008739.3-201ENST00000603262 127 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AL713866.2-201ENST00000603579 219 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 AL138825.1-201ENST00000618587 192 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 MIR6500-201ENST00000622700 86 ntBASIC5.65□□□□□ -1.5
CSB-PGBD3P0DP91 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
CSB-PGBD3P0DP91 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.65□□□□□ -1.51
CSB-PGBD3P0DP91 AL136964.1-201ENST00000622038 2990 ntBASIC5.65□□□□□ -1.51
CSB-PGBD3P0DP91 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.65□□□□□ -1.51
CSB-PGBD3P0DP91 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CSB-PGBD3P0DP91 OR4G2P-202ENST00000641004 1759 ntBASIC5.65□□□□□ -1.51
CSB-PGBD3P0DP91 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AP001273.1-201ENST00000624493 3152 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AC138393.1-203ENST00000327086 343 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 DEFB108F-201ENST00000344638 222 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.270-201ENST00000364693 104 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.333-201ENST00000365274 102 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.416-201ENST00000384014 113 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-886P-201ENST00000384319 105 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 MIR517A-201ENST00000385001 87 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 MIR514A1-201ENST00000385133 98 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-1156P-201ENST00000410365 100 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-293P-201ENST00000411259 106 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 RPL23AP46-201ENST00000438548 490 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 FCF1P4-201ENST00000448326 183 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AL031274.1-201ENST00000450334 232 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AP000942.1-201ENST00000463969 747 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 TRBVB-201ENST00000477100 408 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 SNORA40.15-201ENST00000516884 107 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-897P-201ENST00000517135 105 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 CYCSP27-201ENST00000527643 293 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 SNRPGP16-201ENST00000533275 226 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AC006600.1-201ENST00000572529 153 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 AC012119.1-201ENST00000603184 222 ntBASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CSB-PGBD3P0DP91 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.29-201ENST00000362570 113 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.105-201ENST00000363182 111 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 SNORD46.1-201ENST00000364139 104 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms