Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RPS15AP34-201ENST00000487776 387 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC109927.2-201ENST00000506416 303 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC010486.3-201ENST00000511602 785 ntBASIC2.77□□□□□ -1.97
VIMP08670 RNA5SP367-201ENST00000516557 118 ntBASIC2.77□□□□□ -1.97
VIMP08670 Vault.3-201ENST00000516676 95 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC009902.1-201ENST00000519351 183 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.77□□□□□ -1.97
VIMP08670 OR4R1P-201ENST00000529879 463 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.77□□□□□ -1.97
VIMP08670 AC021739.1-201ENST00000559631 174 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.77□□□□□ -1.97
VIMP08670 AC137800.2-201ENST00000574375 120 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.77□□□□□ -1.97
VIMP08670 AL451007.1-201ENST00000595491 289 ntBASIC2.77□□□□□ -1.97
VIMP08670 SEPT7P9-203ENST00000604116 343 ntBASIC2.77□□□□□ -1.97
VIMP08670 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.77□□□□□ -1.97
VIMP08670 MIR15A-201ENST00000607334 83 ntBASIC2.77□□□□□ -1.97
VIMP08670 U6.99-201ENST00000637524 83 ntBASIC2.77□□□□□ -1.97
VIMP08670 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VIMP08670 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.77□□□□□ -1.97
VIMP08670 AC010889.1-201ENST00000566193 2666 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC000403.1-201ENST00000613696 3585 ntBASIC2.76□□□□□ -1.97
VIMP08670 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.76□□□□□ -1.97
VIMP08670 Y_RNA.126-201ENST00000363382 111 ntBASIC2.76□□□□□ -1.97
VIMP08670 SNORA38.1-201ENST00000364172 131 ntBASIC2.76□□□□□ -1.97
VIMP08670 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.76□□□□□ -1.97
VIMP08670 RNU1-138P-201ENST00000384093 164 ntBASIC2.76□□□□□ -1.97
VIMP08670 MIR301A-201ENST00000385261 86 ntBASIC2.76□□□□□ -1.97
VIMP08670 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VIMP08670 RPS4XP7-201ENST00000406274 780 ntBASIC2.76□□□□□ -1.97
VIMP08670 RNU2-39P-201ENST00000410604 198 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.76□□□□□ -1.97
VIMP08670 AC090960.1-201ENST00000421072 306 ntBASIC2.76□□□□□ -1.97
VIMP08670 AL109913.1-201ENST00000421173 514 ntBASIC2.76□□□□□ -1.97
VIMP08670 AL158156.1-201ENST00000422509 473 ntBASIC2.76□□□□□ -1.97
VIMP08670 MED13P1-201ENST00000428342 171 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.76□□□□□ -1.97
VIMP08670 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.76□□□□□ -1.97
VIMP08670 DPPA3P1-201ENST00000448050 469 ntBASIC2.76□□□□□ -1.97
VIMP08670 HMGN2P10-201ENST00000448085 265 ntBASIC2.76□□□□□ -1.97
VIMP08670 PRSS3P4-201ENST00000453323 162 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC091153.1-201ENST00000466297 402 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.76□□□□□ -1.97
VIMP08670 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.76□□□□□ -1.97
VIMP08670 AC091965.2-201ENST00000512324 613 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.76□□□□□ -1.97
VIMP08670 SCARNA17.1-201ENST00000516211 143 ntBASIC2.76□□□□□ -1.97
VIMP08670 SCARNA17.2-201ENST00000516334 143 ntBASIC2.76□□□□□ -1.97
VIMP08670 RNU6-1315P-201ENST00000517187 99 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC025755.1-201ENST00000521306 278 ntBASIC2.76□□□□□ -1.97
VIMP08670 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.76□□□□□ -1.97
VIMP08670 AP002453.2-201ENST00000533503 320 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VIMP08670 AC103810.1-201ENST00000579873 453 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC024619.4-201ENST00000580924 316 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.76□□□□□ -1.97
VIMP08670 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.76□□□□□ -1.97
VIMP08670 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.76□□□□□ -1.97
VIMP08670 AC090578.1-201ENST00000604955 591 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC007938.3-201ENST00000604965 623 ntBASIC2.76□□□□□ -1.97
VIMP08670 SCARNA17.4-201ENST00000614296 143 ntBASIC2.76□□□□□ -1.97
VIMP08670 AC093536.2-201ENST00000565257 1406 ntBASIC2.76□□□□□ -1.97
VIMP08670 ADAM3A-203ENST00000461344 2157 ntBASIC2.76□□□□□ -1.97
VIMP08670 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
VIMP08670 FARSBP1-201ENST00000435808 1778 ntBASIC2.75□□□□□ -1.97
VIMP08670 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.75□□□□□ -1.97
VIMP08670 Y_RNA.22-201ENST00000362492 102 ntBASIC2.75□□□□□ -1.97
VIMP08670 SNORA71.1-201ENST00000364523 117 ntBASIC2.75□□□□□ -1.97
VIMP08670 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
VIMP08670 RNU6-169P-201ENST00000365336 107 ntBASIC2.75□□□□□ -1.97
VIMP08670 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VIMP08670 RNU6-641P-201ENST00000384006 107 ntBASIC2.75□□□□□ -1.97
VIMP08670 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VIMP08670 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.75□□□□□ -1.97
VIMP08670 RNA5SP181-201ENST00000410246 98 ntBASIC2.75□□□□□ -1.97
VIMP08670 RN7SKP142-201ENST00000411236 328 ntBASIC2.75□□□□□ -1.97
VIMP08670 AC096649.2-201ENST00000416186 393 ntBASIC2.75□□□□□ -1.97
VIMP08670 AC022018.1-201ENST00000430685 241 ntBASIC2.75□□□□□ -1.97
VIMP08670 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.75□□□□□ -1.97
VIMP08670 AC073614.1-201ENST00000438690 650 ntBASIC2.75□□□□□ -1.97
VIMP08670 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.75□□□□□ -1.97
VIMP08670 BRK1P2-201ENST00000442875 223 ntBASIC2.75□□□□□ -1.97
VIMP08670 VN1R34P-201ENST00000447387 883 ntBASIC2.75□□□□□ -1.97
VIMP08670 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.75□□□□□ -1.97
VIMP08670 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.75□□□□□ -1.97
VIMP08670 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.75□□□□□ -1.97
VIMP08670 AC107626.1-201ENST00000471084 183 ntBASIC2.75□□□□□ -1.97
VIMP08670 TRBV1-201ENST00000476502 284 ntBASIC2.75□□□□□ -1.97
VIMP08670 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.75□□□□□ -1.97
VIMP08670 SCARNA24.1-201ENST00000516465 137 ntBASIC2.75□□□□□ -1.97
VIMP08670 RNU6-1183P-201ENST00000517054 60 ntBASIC2.75□□□□□ -1.97
VIMP08670 RNA5SP402-201ENST00000517148 110 ntBASIC2.75□□□□□ -1.97
VIMP08670 RNU1-104P-201ENST00000517280 175 ntBASIC2.75□□□□□ -1.97
VIMP08670 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.75□□□□□ -1.97
VIMP08670 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.75□□□□□ -1.97
VIMP08670 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.75□□□□□ -1.97
VIMP08670 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.75□□□□□ -1.97
VIMP08670 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VIMP08670 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VIMP08670 AC006199.1-201ENST00000548728 219 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms