Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC002381.1-201ENST00000447049 280 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 RPS15AP27-201ENST00000449183 343 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A2P08572 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A2P08572 AC093281.2-201ENST00000510153 597 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AC079395.1-201ENST00000510981 262 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A2P08572 RNU6-928P-201ENST00000516876 104 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AC091163.3-201ENST00000518269 1144 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A2P08572 TRAV28-201ENST00000557548 323 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A2P08572 SNORA4-201ENST00000584302 138 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
COL4A2P08572 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AL353997.4-201ENST00000586196 166 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AL353770.2-201ENST00000620024 78 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 UCA1.1-201ENST00000620952 75 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AP002371.2-201ENST00000624450 503 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AL390862.1-201ENST00000635467 1469 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL4A2P08572 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL4A2P08572 RNU6-461P-201ENST00000364195 107 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 RNU6-637P-201ENST00000384050 107 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 RNU6-217P-201ENST00000384164 104 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 MIR627-201ENST00000384979 97 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 SNORA40.2-201ENST00000390847 128 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 ANAPC10P1-201ENST00000395991 556 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AL449283.1-202ENST00000418249 604 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 NDUFB4P7-201ENST00000423198 363 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AL049734.2-201ENST00000441066 616 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AC009238.1-201ENST00000442165 424 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AC009237.6-201ENST00000446969 424 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 MTND1P31-201ENST00000449206 961 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.5□□□□□ -2.17
COL4A2P08572 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A2P08572 AC080013.2-201ENST00000460866 323 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 MTND1P16-201ENST00000465177 898 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AC096571.1-202ENST00000506634 735 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A2P08572 SCARNA15.2-201ENST00000516409 127 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 RNA5SP102-201ENST00000516865 106 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 RNU1-92P-201ENST00000517017 135 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A2P08572 AC090079.2-201ENST00000575289 768 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A2P08572 U73023.1-201ENST00000603134 700 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 SEPT7P9-203ENST00000604116 343 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 BNIP3P31-201ENST00000604515 566 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 MTND4LP5-201ENST00000605152 292 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AL139344.1-201ENST00000605228 195 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.5□□□□□ -2.17
COL4A2P08572 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
COL4A2P08572 AC138915.1-201ENST00000565427 1685 ntBASIC1.5□□□□□ -2.17
COL4A2P08572 SDAD1P2-201ENST00000441308 2028 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
COL4A2P08572 RNU6-97P-201ENST00000363387 104 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 RNU5E-8P-201ENST00000363502 116 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 RNU6-432P-201ENST00000384196 109 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 RNU6-114P-201ENST00000384704 105 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 RNU6-516P-201ENST00000411381 104 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AL590383.1-201ENST00000428602 75 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 RNF2P1-201ENST00000442955 1010 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A2P08572 RNU6-714P-201ENST00000516963 103 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 MTCO1P47-201ENST00000523889 1271 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A2P08572 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A2P08572 OR6C7P-201ENST00000547875 934 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC068135.2-201ENST00000569293 1028 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A2P08572 AF129408.1-201ENST00000608767 431 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC013476.2-201ENST00000614456 459 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC023158.2-201ENST00000614876 543 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AL445264.1-201ENST00000621719 171 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 MTND1P37-201ENST00000636562 264 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A2P08572 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
COL4A2P08572 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
COL4A2P08572 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 Y_RNA.472-201ENST00000384322 102 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 RNU6-278P-201ENST00000390945 109 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms