Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.89□□□□□ -1.95
VTNP04004 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.89□□□□□ -1.95
VTNP04004 RPL23AP84-201ENST00000571193 464 ntBASIC2.89□□□□□ -1.95
VTNP04004 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
VTNP04004 DPPA3P3-201ENST00000603842 430 ntBASIC2.89□□□□□ -1.95
VTNP04004 AC107294.1-201ENST00000609524 467 ntBASIC2.89□□□□□ -1.95
VTNP04004 AL138880.2-201ENST00000616214 239 ntBASIC2.89□□□□□ -1.95
VTNP04004 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
VTNP04004 AL158209.2-201ENST00000619266 216 ntBASIC2.89□□□□□ -1.95
VTNP04004 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.89□□□□□ -1.95
VTNP04004 FRG1KP-201ENST00000623592 341 ntBASIC2.89□□□□□ -1.95
VTNP04004 MTND5P19-201ENST00000424872 1794 ntBASIC2.89□□□□□ -1.95
VTNP04004 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VTNP04004 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VTNP04004 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.88□□□□□ -1.95
VTNP04004 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VTNP04004 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
VTNP04004 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VTNP04004 RNU6-181P-201ENST00000363225 107 ntBASIC2.88□□□□□ -1.95
VTNP04004 RN7SKP226-201ENST00000364912 300 ntBASIC2.88□□□□□ -1.95
VTNP04004 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VTNP04004 RNU1-101P-201ENST00000391171 127 ntBASIC2.88□□□□□ -1.95
VTNP04004 AL354719.1-201ENST00000406535 843 ntBASIC2.88□□□□□ -1.95
VTNP04004 RPLP0P7-201ENST00000416050 667 ntBASIC2.88□□□□□ -1.95
VTNP04004 BTF3L4P3-201ENST00000418879 476 ntBASIC2.88□□□□□ -1.95
VTNP04004 AC133104.1-201ENST00000429100 218 ntBASIC2.88□□□□□ -1.95
VTNP04004 AL356867.1-201ENST00000429623 299 ntBASIC2.88□□□□□ -1.95
VTNP04004 RPL23AP30-201ENST00000432419 501 ntBASIC2.88□□□□□ -1.95
VTNP04004 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
VTNP04004 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
VTNP04004 AL513328.1-201ENST00000446460 224 ntBASIC2.88□□□□□ -1.95
VTNP04004 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.88□□□□□ -1.95
VTNP04004 GAPDHP27-201ENST00000447427 1020 ntBASIC2.88□□□□□ -1.95
VTNP04004 EEF1B2P7-201ENST00000451177 676 ntBASIC2.88□□□□□ -1.95
VTNP04004 MTND2P33-201ENST00000506452 1031 ntBASIC2.88□□□□□ -1.95
VTNP04004 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.88□□□□□ -1.95
VTNP04004 RPL37P25-201ENST00000507308 276 ntBASIC2.88□□□□□ -1.95
VTNP04004 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.88□□□□□ -1.95
VTNP04004 RNU7-51P-201ENST00000516560 62 ntBASIC2.88□□□□□ -1.95
VTNP04004 RNU6-445P-201ENST00000516949 107 ntBASIC2.88□□□□□ -1.95
VTNP04004 MTCYBP20-201ENST00000524239 1129 ntBASIC2.88□□□□□ -1.95
VTNP04004 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.88□□□□□ -1.95
VTNP04004 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.88□□□□□ -1.95
VTNP04004 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.88□□□□□ -1.95
VTNP04004 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.88□□□□□ -1.95
VTNP04004 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.88□□□□□ -1.95
VTNP04004 AC005951.1-201ENST00000576706 485 ntBASIC2.88□□□□□ -1.95
VTNP04004 AC007684.1-201ENST00000609671 477 ntBASIC2.88□□□□□ -1.95
VTNP04004 AC122108.2-201ENST00000611946 526 ntBASIC2.88□□□□□ -1.95
VTNP04004 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.88□□□□□ -1.95
VTNP04004 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.88□□□□□ -1.95
VTNP04004 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNU6-511P-201ENST00000363496 107 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNU6-1284P-201ENST00000363701 100 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNU6-188P-201ENST00000364207 107 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNU6-641P-201ENST00000384006 107 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNU6-1215P-201ENST00000384441 102 ntBASIC2.87□□□□□ -1.95
VTNP04004 AL359634.1-202ENST00000404721 284 ntBASIC2.87□□□□□ -1.95
VTNP04004 NDUFS5P1-201ENST00000405668 289 ntBASIC2.87□□□□□ -1.95
VTNP04004 MTND3P17-201ENST00000416968 344 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC009963.1-201ENST00000417265 157 ntBASIC2.87□□□□□ -1.95
VTNP04004 NDUFB4P7-201ENST00000423198 363 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC092573.2-201ENST00000434546 243 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.87□□□□□ -1.95
VTNP04004 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.87□□□□□ -1.95
VTNP04004 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.87□□□□□ -1.95
VTNP04004 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.87□□□□□ -1.95
VTNP04004 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.87□□□□□ -1.95
VTNP04004 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.87□□□□□ -1.95
VTNP04004 AC007182.2-201ENST00000489251 402 ntBASIC2.87□□□□□ -1.95
VTNP04004 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.87□□□□□ -1.95
VTNP04004 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VTNP04004 TTC39CP1-201ENST00000512513 755 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.87□□□□□ -1.95
VTNP04004 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNA5SP282-201ENST00000516355 108 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNU6-720P-201ENST00000516363 108 ntBASIC2.87□□□□□ -1.95
VTNP04004 SCARNA24.1-201ENST00000516465 137 ntBASIC2.87□□□□□ -1.95
VTNP04004 RNU6-1256P-201ENST00000516539 103 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.87□□□□□ -1.95
VTNP04004 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VTNP04004 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.87□□□□□ -1.95
VTNP04004 SUB1P2-201ENST00000556401 297 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC098848.2-201ENST00000588023 330 ntBASIC2.87□□□□□ -1.95
VTNP04004 GLUD1P4-201ENST00000590914 418 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC002545.1-201ENST00000592511 181 ntBASIC2.87□□□□□ -1.95
VTNP04004 DEFB131E-202ENST00000602581 683 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC013553.2-201ENST00000604244 589 ntBASIC2.87□□□□□ -1.95
VTNP04004 HSPE1P7-201ENST00000604681 321 ntBASIC2.87□□□□□ -1.95
VTNP04004 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.87□□□□□ -1.95
VTNP04004 AC027309.3-201ENST00000623419 351 ntBASIC2.87□□□□□ -1.95
VTNP04004 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.87□□□□□ -1.95
VTNP04004 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
VTNP04004 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
VTNP04004 AC027514.1-201ENST00000588561 1603 ntBASIC2.86□□□□□ -1.95
VTNP04004 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.86□□□□□ -1.95
VTNP04004 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VTNP04004 AC108206.1-201ENST00000570186 4159 ntBASIC2.86□□□□□ -1.95
VTNP04004 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
VTNP04004 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms