Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RN7SKP226-201ENST00000364912 300 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 RNU6-259P-201ENST00000383999 107 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 RNU6-851P-201ENST00000384565 107 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 RNU6-14P-201ENST00000384630 106 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MT-ND1P03886 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MT-ND1P03886 RNU2-8P-201ENST00000410727 190 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 PIGFP2-201ENST00000421400 651 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.61□□□□□ -1.99
MT-ND1P03886 GTF2IP20-201ENST00000431663 360 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 USP12PX-201ENST00000432383 1057 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.61□□□□□ -1.99
MT-ND1P03886 DNAJC19P4-201ENST00000440115 345 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.61□□□□□ -1.99
MT-ND1P03886 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.61□□□□□ -1.99
MT-ND1P03886 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AL160314.1-201ENST00000490836 438 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.61□□□□□ -1.99
MT-ND1P03886 SUMO2P6-201ENST00000505273 288 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 RNU6-445P-201ENST00000516949 107 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC022634.1-201ENST00000520765 532 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.61□□□□□ -1.99
MT-ND1P03886 AP006587.4-201ENST00000526053 529 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND1P03886 AP002404.1-201ENST00000532005 451 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND1P03886 AC087883.1-201ENST00000551882 391 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 H3F3AP1-201ENST00000559984 334 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC073648.5-201ENST00000603502 305 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC245014.2-201ENST00000603689 287 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AP000787.2-201ENST00000604432 568 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC246785.4-201ENST00000605374 287 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MT-ND1P03886 MIR98-201ENST00000606724 119 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AL161734.1-201ENST00000609720 557 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 MIR6798-201ENST00000612887 67 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 AC072046.2-201ENST00000618366 268 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 MTND5P1-201ENST00000445440 1375 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND1P03886 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND1P03886 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
MT-ND1P03886 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND1P03886 SMIM11P1-201ENST00000369586 178 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 RNU6-701P-201ENST00000384059 107 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 MIR888-201ENST00000401186 77 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 RNU2-25P-201ENST00000411041 191 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 MTCO2P11-201ENST00000431069 680 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 RPL23AP30-201ENST00000432419 501 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 RPS15AP9-201ENST00000439856 381 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.6□□□□□ -1.99
MT-ND1P03886 AC020550.1-201ENST00000447385 163 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AC132479.1-201ENST00000449160 144 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND1P03886 C1DP4-201ENST00000455429 424 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.6□□□□□ -1.99
MT-ND1P03886 MRPS17P3-201ENST00000465453 385 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND1P03886 AC126182.1-201ENST00000478134 357 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.6□□□□□ -1.99
MT-ND1P03886 RNU6-720P-201ENST00000516363 108 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.6□□□□□ -1.99
MT-ND1P03886 AC093012.1-202ENST00000549403 582 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.6□□□□□ -1.99
MT-ND1P03886 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.6□□□□□ -1.99
MT-ND1P03886 AL391840.1-201ENST00000571144 367 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 HMGN2P15-201ENST00000585707 270 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 ZNF861P-201ENST00000588126 639 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.6□□□□□ -1.99
MT-ND1P03886 AC015540.1-201ENST00000615828 501 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.6□□□□□ -1.99
MT-ND1P03886 CR381653.2-201ENST00000624041 768 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 AC096644.4-201ENST00000563417 2912 ntBASIC2.6□□□□□ -1.99
MT-ND1P03886 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MT-ND1P03886 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
MT-ND1P03886 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.59□□□□□ -1.99
MT-ND1P03886 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 Y_RNA.3-201ENST00000362331 103 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 RNA5SP374-201ENST00000362939 125 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 NDUFS5P1-201ENST00000405668 289 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 MTCO1P21-201ENST00000416634 589 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND1P03886 AL136380.1-201ENST00000447970 162 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 NIPA2P5-201ENST00000452282 464 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 RPL26P9-201ENST00000457466 433 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
MT-ND1P03886 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND1P03886 TBCAP3-201ENST00000512475 312 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 MRPS36P2-201ENST00000512569 299 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 RNU2-10P-201ENST00000516375 211 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
MT-ND1P03886 HMGB1P41-201ENST00000520234 440 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.59□□□□□ -1.99
MT-ND1P03886 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
MT-ND1P03886 GLYCAM1-201ENST00000546596 285 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms