Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC097460.3-201ENST00000623099 442 ntBASIC1.69□□□□□ -2.14
APOEP02649 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
APOEP02649 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
APOEP02649 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
APOEP02649 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
APOEP02649 RNU6-486P-201ENST00000363116 107 ntBASIC1.68□□□□□ -2.14
APOEP02649 U3.13-201ENST00000364804 214 ntBASIC1.68□□□□□ -2.14
APOEP02649 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.68□□□□□ -2.14
APOEP02649 RNU6-748P-201ENST00000384648 107 ntBASIC1.68□□□□□ -2.14
APOEP02649 RNU6-482P-201ENST00000391068 107 ntBASIC1.68□□□□□ -2.14
APOEP02649 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
APOEP02649 PTGES3P2-201ENST00000407942 482 ntBASIC1.68□□□□□ -2.14
APOEP02649 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.68□□□□□ -2.14
APOEP02649 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.68□□□□□ -2.14
APOEP02649 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.68□□□□□ -2.14
APOEP02649 CECR9-201ENST00000453421 199 ntBASIC1.68□□□□□ -2.14
APOEP02649 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.68□□□□□ -2.14
APOEP02649 snoU13.8-201ENST00000458890 104 ntBASIC1.68□□□□□ -2.14
APOEP02649 AP001324.2-201ENST00000461163 319 ntBASIC1.68□□□□□ -2.14
APOEP02649 AC096745.1-201ENST00000509945 370 ntBASIC1.68□□□□□ -2.14
APOEP02649 MRPS33P3-201ENST00000513456 322 ntBASIC1.68□□□□□ -2.14
APOEP02649 SMURF2P1-201ENST00000514992 481 ntBASIC1.68□□□□□ -2.14
APOEP02649 SNORA25.11-201ENST00000515935 105 ntBASIC1.68□□□□□ -2.14
APOEP02649 RNU6-714P-201ENST00000516963 103 ntBASIC1.68□□□□□ -2.14
APOEP02649 AP005639.2-201ENST00000527592 928 ntBASIC1.68□□□□□ -2.14
APOEP02649 AC084851.1-201ENST00000529105 249 ntBASIC1.68□□□□□ -2.14
APOEP02649 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.68□□□□□ -2.14
APOEP02649 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.68□□□□□ -2.14
APOEP02649 AC006199.1-201ENST00000548728 219 ntBASIC1.68□□□□□ -2.14
APOEP02649 AC021739.1-201ENST00000559631 174 ntBASIC1.68□□□□□ -2.14
APOEP02649 AP001269.3-201ENST00000588718 329 ntBASIC1.68□□□□□ -2.14
APOEP02649 AC126118.1-201ENST00000607744 628 ntBASIC1.68□□□□□ -2.14
APOEP02649 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
APOEP02649 AC120349.2-201ENST00000625002 298 ntBASIC1.68□□□□□ -2.14
APOEP02649 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.67□□□□□ -2.14
APOEP02649 RNU6-343P-201ENST00000364709 104 ntBASIC1.67□□□□□ -2.14
APOEP02649 CCNG1P1-201ENST00000406783 885 ntBASIC1.67□□□□□ -2.14
APOEP02649 TPMTP3-201ENST00000411928 735 ntBASIC1.67□□□□□ -2.14
APOEP02649 MTCYBP38-201ENST00000417160 1123 ntBASIC1.67□□□□□ -2.14
APOEP02649 AL161651.1-201ENST00000440882 223 ntBASIC1.67□□□□□ -2.14
APOEP02649 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.67□□□□□ -2.14
APOEP02649 AC140059.1-201ENST00000489238 361 ntBASIC1.67□□□□□ -2.14
APOEP02649 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.67□□□□□ -2.14
APOEP02649 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.67□□□□□ -2.14
APOEP02649 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.67□□□□□ -2.14
APOEP02649 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.67□□□□□ -2.14
APOEP02649 NACAP3-201ENST00000552100 481 ntBASIC1.67□□□□□ -2.14
APOEP02649 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.67□□□□□ -2.14
APOEP02649 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.67□□□□□ -2.14
APOEP02649 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.67□□□□□ -2.14
APOEP02649 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
APOEP02649 LINC00557-201ENST00000563184 1279 ntBASIC1.67□□□□□ -2.14
APOEP02649 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.67□□□□□ -2.14
APOEP02649 AC068944.2-201ENST00000610373 403 ntBASIC1.67□□□□□ -2.14
APOEP02649 uc_338.14-201ENST00000613162 166 ntBASIC1.67□□□□□ -2.14
APOEP02649 ZNF72P-201ENST00000425869 1908 ntBASIC1.66□□□□□ -2.14
APOEP02649 UBE2L2-201ENST00000254302 429 ntBASIC1.66□□□□□ -2.14
APOEP02649 RNA5SP99-201ENST00000364020 114 ntBASIC1.66□□□□□ -2.14
APOEP02649 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.66□□□□□ -2.14
APOEP02649 SNORD65.1-201ENST00000390889 71 ntBASIC1.66□□□□□ -2.14
APOEP02649 RNA5SP450-201ENST00000411206 102 ntBASIC1.66□□□□□ -2.14
APOEP02649 BTF3L4P3-201ENST00000418879 476 ntBASIC1.66□□□□□ -2.14
APOEP02649 HSPE1P21-201ENST00000438283 308 ntBASIC1.66□□□□□ -2.14
APOEP02649 PTGES3P1-201ENST00000439531 483 ntBASIC1.66□□□□□ -2.14
APOEP02649 MOB1AP2-201ENST00000446060 614 ntBASIC1.66□□□□□ -2.14
APOEP02649 HMGN2P10-201ENST00000448085 265 ntBASIC1.66□□□□□ -2.14
APOEP02649 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.66□□□□□ -2.14
APOEP02649 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.66□□□□□ -2.14
APOEP02649 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
APOEP02649 SNORA4.4-201ENST00000515921 135 ntBASIC1.66□□□□□ -2.14
APOEP02649 RNA5SP112-201ENST00000515937 99 ntBASIC1.66□□□□□ -2.14
APOEP02649 SNORD19.2-201ENST00000516978 73 ntBASIC1.66□□□□□ -2.14
APOEP02649 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.66□□□□□ -2.14
APOEP02649 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.66□□□□□ -2.14
APOEP02649 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.66□□□□□ -2.14
APOEP02649 SNORD53B-201ENST00000577887 78 ntBASIC1.66□□□□□ -2.14
APOEP02649 MIR4769-201ENST00000584126 77 ntBASIC1.66□□□□□ -2.14
APOEP02649 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
APOEP02649 AL391813.2-201ENST00000609113 322 ntBASIC1.66□□□□□ -2.14
APOEP02649 AC091953.2-201ENST00000623979 160 ntBASIC1.66□□□□□ -2.14
APOEP02649 MTCO1P4-201ENST00000520516 1409 ntBASIC1.66□□□□□ -2.14
APOEP02649 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
APOEP02649 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
APOEP02649 RNU2-63P-201ENST00000410792 194 ntBASIC1.65□□□□□ -2.15
APOEP02649 RNU6-516P-201ENST00000411381 104 ntBASIC1.65□□□□□ -2.15
APOEP02649 AL353729.1-201ENST00000425044 720 ntBASIC1.65□□□□□ -2.15
APOEP02649 DPRXP1-201ENST00000426312 460 ntBASIC1.65□□□□□ -2.15
APOEP02649 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.65□□□□□ -2.15
APOEP02649 ELOCP14-201ENST00000428070 331 ntBASIC1.65□□□□□ -2.15
APOEP02649 FO393414.1-201ENST00000428697 1184 ntBASIC1.65□□□□□ -2.15
APOEP02649 MTND1P28-201ENST00000435623 950 ntBASIC1.65□□□□□ -2.15
APOEP02649 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.65□□□□□ -2.15
APOEP02649 ELOCP7-201ENST00000439968 331 ntBASIC1.65□□□□□ -2.15
APOEP02649 AL158053.1-201ENST00000441503 453 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC009238.1-201ENST00000442165 424 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC009237.6-201ENST00000446969 424 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.65□□□□□ -2.15
APOEP02649 AC008379.1-201ENST00000463655 464 ntBASIC1.65□□□□□ -2.15
APOEP02649 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.65□□□□□ -2.15
APOEP02649 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms