Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL450270.1-201ENST00000606160 391 ntBASIC1.22□□□□□ -2.21
IFNA1P01562 AL359314.1-201ENST00000616913 261 ntBASIC1.22□□□□□ -2.21
IFNA1P01562 AC091304.6-201ENST00000619761 202 ntBASIC1.22□□□□□ -2.21
IFNA1P01562 U1.36-201ENST00000620684 176 ntBASIC1.22□□□□□ -2.21
IFNA1P01562 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
IFNA1P01562 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
IFNA1P01562 UBE2L2-201ENST00000254302 429 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
IFNA1P01562 RNU6-549P-201ENST00000384433 107 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 RNU6-658P-201ENST00000384606 106 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 BTF3L4P2-201ENST00000392798 346 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 TXNP7-201ENST00000406296 293 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 SNORA11.1-201ENST00000408133 129 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 MIR1304-201ENST00000408243 91 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AC127391.1-201ENST00000411737 98 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 USP9YP6-201ENST00000413550 854 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 RPL30P13-201ENST00000418873 348 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 MTCO2P5-201ENST00000422621 426 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 MTCO3P46-201ENST00000425787 232 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.21□□□□□ -2.22
IFNA1P01562 AC010153.1-201ENST00000432862 727 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.21□□□□□ -2.22
IFNA1P01562 HMGB1P18-201ENST00000438801 619 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.21□□□□□ -2.22
IFNA1P01562 FCF1P6-201ENST00000456841 595 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AC008379.1-201ENST00000463655 464 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AC098862.1-201ENST00000504991 413 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 RNA5SP182-201ENST00000516064 82 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.21□□□□□ -2.22
IFNA1P01562 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
IFNA1P01562 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.21□□□□□ -2.22
IFNA1P01562 MRPS36P5-201ENST00000551909 298 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.21□□□□□ -2.22
IFNA1P01562 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.21□□□□□ -2.22
IFNA1P01562 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.21□□□□□ -2.22
IFNA1P01562 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.21□□□□□ -2.22
IFNA1P01562 RPAP2P1-201ENST00000603626 1168 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 BX248123.2-201ENST00000606318 124 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 AC017037.3-201ENST00000625016 472 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
IFNA1P01562 MTND5P10-201ENST00000603719 1809 ntBASIC1.21□□□□□ -2.22
IFNA1P01562 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
IFNA1P01562 RNA5SP88-201ENST00000365560 109 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 Z98749.2-208ENST00000381646 500 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 RNU1-57P-201ENST00000384491 166 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
IFNA1P01562 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.2□□□□□ -2.22
IFNA1P01562 BTF3L4P3-201ENST00000418879 476 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 VN1R108P-201ENST00000431580 830 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.2□□□□□ -2.22
IFNA1P01562 AC092427.1-201ENST00000439177 601 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.2□□□□□ -2.22
IFNA1P01562 snoU13.8-201ENST00000458890 104 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 AC112771.1-201ENST00000463581 102 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.2□□□□□ -2.22
IFNA1P01562 AC069528.1-202ENST00000482888 637 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.2□□□□□ -2.22
IFNA1P01562 AP003497.1-201ENST00000528472 562 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 PSMA3P-201ENST00000555485 635 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.2□□□□□ -2.22
IFNA1P01562 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.2□□□□□ -2.22
IFNA1P01562 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.2□□□□□ -2.22
IFNA1P01562 AC069304.2-201ENST00000605154 435 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 AC021646.1-201ENST00000605469 484 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 MIR502-201ENST00000606349 86 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.2□□□□□ -2.22
IFNA1P01562 HPVC1-201ENST00000629899 1198 ntBASIC1.2□□□□□ -2.22
IFNA1P01562 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.2□□□□□ -2.22
IFNA1P01562 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.2□□□□□ -2.22
IFNA1P01562 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.2□□□□□ -2.22
IFNA1P01562 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
IFNA1P01562 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
IFNA1P01562 RNU6-1300P-201ENST00000391046 108 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 DHFRP6-201ENST00000401776 268 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 Z98742.3-201ENST00000418637 326 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AC104454.1-201ENST00000421341 1401 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 BX510359.4-201ENST00000423750 193 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AC244035.1-201ENST00000430042 390 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 USP9YP22-201ENST00000438971 294 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.19□□□□□ -2.22
IFNA1P01562 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
IFNA1P01562 AC008481.1-201ENST00000463278 396 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.19□□□□□ -2.22
IFNA1P01562 OR5B19P-201ENST00000531766 928 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.19□□□□□ -2.22
IFNA1P01562 AC110588.1-201ENST00000559699 137 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AC008269.2-201ENST00000561915 1105 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 SUB1P3-201ENST00000564581 315 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AC073544.2-201ENST00000601155 540 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AP001485.1-201ENST00000604799 199 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AC087241.4-201ENST00000612441 480 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 AC084768.2-201ENST00000622736 221 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 MIR1322-201ENST00000638013 71 ntBASIC1.19□□□□□ -2.22
IFNA1P01562 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.19□□□□□ -2.22
IFNA1P01562 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.19□□□□□ -2.22
IFNA1P01562 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms