Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RPS15AP28-201ENST00000435088 386 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 TIMM9P1-201ENST00000436122 256 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN9O95484 HMGN2P10-201ENST00000448085 265 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.24□□□□□ -2.05
CLDN9O95484 SNORA31.11-201ENST00000516528 139 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 SCARNA1-201ENST00000517138 166 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AP006587.4-201ENST00000526053 529 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 OR4R1P-201ENST00000529879 463 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC135628.1-201ENST00000568867 534 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AL356432.3-201ENST00000568952 465 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN9O95484 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN9O95484 BNIP3P39-201ENST00000601077 554 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC008121.1-201ENST00000603244 268 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN9O95484 AC025594.3-201ENST00000613068 790 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC011939.3-201ENST00000613686 466 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 CTSLP2-204ENST00000629029 392 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 AC007336.1-201ENST00000576365 3828 ntBASIC2.24□□□□□ -2.05
CLDN9O95484 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN9O95484 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN9O95484 Y_RNA.18-201ENST00000362461 102 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 SNORA67.1-201ENST00000364749 141 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN9O95484 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 AC009963.1-201ENST00000417265 157 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 ZNF90P2-204ENST00000419323 1075 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN9O95484 MTND1P20-201ENST00000430341 950 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 AL161651.1-201ENST00000440882 223 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 snoU13.26-201ENST00000459452 105 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 RN7SL636P-201ENST00000497504 294 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN9O95484 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN9O95484 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN9O95484 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 AC078814.3-201ENST00000553036 491 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN9O95484 AL121821.2-201ENST00000556081 394 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 MYL12BP1-201ENST00000569826 507 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 MIR4307-201ENST00000582802 84 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN9O95484 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN9O95484 AC013244.3-201ENST00000605614 388 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 AC016597.2-201ENST00000613256 341 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 AC021755.4-201ENST00000616620 456 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 AC007490.1-201ENST00000624321 703 ntBASIC2.23□□□□□ -2.05
CLDN9O95484 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN9O95484 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN9O95484 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN9O95484 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN9O95484 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN9O95484 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN9O95484 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN9O95484 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 SNORA38-201ENST00000363946 132 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.22□□□□□ -2.05
CLDN9O95484 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN9O95484 ELOCP17-201ENST00000414751 326 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 Z82209.1-201ENST00000422141 2135 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN9O95484 SDR42E1P3-201ENST00000438345 502 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN9O95484 NEFMP1-201ENST00000443423 1006 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 MTATP6P7-201ENST00000453315 681 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 MTCO1P42-201ENST00000457379 726 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN9O95484 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN9O95484 SNORD19.2-201ENST00000516978 73 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN9O95484 AP000889.2-201ENST00000532684 490 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 AC023050.2-201ENST00000544968 387 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.22□□□□□ -2.05
CLDN9O95484 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN9O95484 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN9O95484 AC025588.2-201ENST00000604851 466 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 AL021997.1-201ENST00000605757 193 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN9O95484 AL136370.1-201ENST00000608166 691 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
CLDN9O95484 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN9O95484 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
CLDN9O95484 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN9O95484 NACAP2-201ENST00000318548 624 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 Y_RNA.46-201ENST00000362695 102 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 OR5H15-201ENST00000383696 930 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 U8.14-201ENST00000390843 143 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 AL591416.1-201ENST00000404015 867 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 RNU6-584P-201ENST00000410350 95 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 AL109913.1-201ENST00000421173 514 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms