Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR365A-201ENST00000362260 87 ntBASIC0.23□□□□□ -2.37
USH2AO75445 RNU6-234P-201ENST00000365229 104 ntBASIC0.23□□□□□ -2.37
USH2AO75445 MIR515-2-201ENST00000384883 83 ntBASIC0.23□□□□□ -2.37
USH2AO75445 MIR515-1-201ENST00000384884 83 ntBASIC0.23□□□□□ -2.37
USH2AO75445 MIR17-201ENST00000385012 84 ntBASIC0.23□□□□□ -2.37
USH2AO75445 CISD1P1-201ENST00000393907 327 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AL512604.1-201ENST00000404812 257 ntBASIC0.23□□□□□ -2.37
USH2AO75445 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.23□□□□□ -2.37
USH2AO75445 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.23□□□□□ -2.37
USH2AO75445 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.23□□□□□ -2.37
USH2AO75445 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.23□□□□□ -2.37
USH2AO75445 AL355802.3-201ENST00000607571 545 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC005332.10-201ENST00000612725 619 ntBASIC0.23□□□□□ -2.37
USH2AO75445 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.23□□□□□ -2.37
USH2AO75445 Y_RNA.86-201ENST00000363020 111 ntBASIC0.23□□□□□ -2.37
USH2AO75445 RNY4P27-201ENST00000363341 96 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.23□□□□□ -2.37
USH2AO75445 CENPUP2-201ENST00000555897 1186 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC079148.1-201ENST00000565944 819 ntBASIC0.23□□□□□ -2.37
USH2AO75445 MTCO3P24-201ENST00000572729 782 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AP001486.3-201ENST00000615334 372 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC006249.1-201ENST00000621223 471 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC091812.1-201ENST00000432235 1948 ntBASIC0.23□□□□□ -2.37
USH2AO75445 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.23□□□□□ -2.37
USH2AO75445 MT-TQ-201ENST00000387372 72 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AL031577.2-201ENST00000404133 280 ntBASIC0.22□□□□□ -2.37
USH2AO75445 RPL23AP54-201ENST00000495129 419 ntBASIC0.22□□□□□ -2.37
USH2AO75445 COX7A2P2-201ENST00000505291 250 ntBASIC0.22□□□□□ -2.37
USH2AO75445 RNA5SP471-201ENST00000516971 106 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.22□□□□□ -2.37
USH2AO75445 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.22□□□□□ -2.37
USH2AO75445 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.22□□□□□ -2.37
USH2AO75445 AC003001.2-201ENST00000616294 831 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AL589935.2-201ENST00000616471 1231 ntBASIC0.22□□□□□ -2.37
USH2AO75445 SNORA16B-201ENST00000364674 135 ntBASIC0.22□□□□□ -2.37
USH2AO75445 U8.7-201ENST00000364940 136 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.22□□□□□ -2.37
USH2AO75445 AC023424.2-201ENST00000493479 777 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.22□□□□□ -2.37
USH2AO75445 AL669831.4-202ENST00000590817 238 ntBASIC0.22□□□□□ -2.37
USH2AO75445 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AC083865.1-201ENST00000636634 831 ntBASIC0.22□□□□□ -2.37
USH2AO75445 SNORA51.2-201ENST00000364595 132 ntBASIC0.22□□□□□ -2.37
USH2AO75445 KLF3P2-201ENST00000465138 268 ntBASIC0.22□□□□□ -2.37
USH2AO75445 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
USH2AO75445 AC103851.1-201ENST00000506833 274 ntBASIC0.22□□□□□ -2.37
USH2AO75445 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.22□□□□□ -2.37
USH2AO75445 AC009712.1-201ENST00000564938 316 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AL136313.1-201ENST00000624804 202 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.22□□□□□ -2.37
USH2AO75445 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
USH2AO75445 TPTE2P4-201ENST00000258589 1605 ntBASIC0.22□□□□□ -2.37
USH2AO75445 MRPL35P1-201ENST00000404272 572 ntBASIC0.22□□□□□ -2.37
USH2AO75445 RPS20P20-201ENST00000460498 340 ntBASIC0.22□□□□□ -2.37
USH2AO75445 AC034114.1-201ENST00000520293 285 ntBASIC0.22□□□□□ -2.37
USH2AO75445 MTCO3P46-201ENST00000425787 232 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL031183.1-201ENST00000457667 207 ntBASIC0.21□□□□□ -2.38
USH2AO75445 COL6A4P2-205ENST00000509855 506 ntBASIC0.21□□□□□ -2.38
USH2AO75445 MIR4305-201ENST00000583252 102 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.21□□□□□ -2.38
USH2AO75445 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
USH2AO75445 SNORA14A-201ENST00000364773 135 ntBASIC0.21□□□□□ -2.38
USH2AO75445 Y_RNA.428-201ENST00000384078 102 ntBASIC0.21□□□□□ -2.38
USH2AO75445 MIR147B-201ENST00000390185 80 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL356057.2-201ENST00000403318 432 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL161449.1-201ENST00000414531 1199 ntBASIC0.21□□□□□ -2.38
USH2AO75445 MTND5P8-201ENST00000449817 1083 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL157398.1-201ENST00000452981 186 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AC105252.1-201ENST00000503089 286 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.21□□□□□ -2.38
USH2AO75445 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.21□□□□□ -2.38
USH2AO75445 MIR3122-201ENST00000577243 73 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL096840.1-201ENST00000603287 93 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AC008555.8-201ENST00000623602 2168 ntBASIC0.21□□□□□ -2.38
USH2AO75445 SNORA50A-201ENST00000384225 134 ntBASIC0.21□□□□□ -2.38
USH2AO75445 MIR124-3-201ENST00000384866 87 ntBASIC0.21□□□□□ -2.38
USH2AO75445 RPS6P14-201ENST00000425165 719 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AC010285.1-201ENST00000470580 392 ntBASIC0.21□□□□□ -2.38
USH2AO75445 CYCTP-201ENST00000504253 315 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AC021146.9-201ENST00000512503 156 ntBASIC0.21□□□□□ -2.38
USH2AO75445 SNORA76.2-201ENST00000517095 137 ntBASIC0.21□□□□□ -2.38
USH2AO75445 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.21□□□□□ -2.38
USH2AO75445 MTCYBP23-201ENST00000558717 1102 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AC002545.1-201ENST00000592511 181 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.21□□□□□ -2.38
USH2AO75445 AC243960.4-201ENST00000600532 288 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL355297.2-201ENST00000604792 129 ntBASIC0.21□□□□□ -2.38
USH2AO75445 AL138726.1-201ENST00000614873 333 ntBASIC0.21□□□□□ -2.38
USH2AO75445 U8.3-201ENST00000363321 132 ntBASIC0.21□□□□□ -2.38
USH2AO75445 Y_RNA.181-201ENST00000363872 101 ntBASIC0.21□□□□□ -2.38
USH2AO75445 RPL37P21-201ENST00000435890 276 ntBASIC0.21□□□□□ -2.38
USH2AO75445 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
USH2AO75445 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.21□□□□□ -2.38
USH2AO75445 AP006587.4-201ENST00000526053 529 ntBASIC0.21□□□□□ -2.38
USH2AO75445 SNORD114-31-201ENST00000363219 75 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.2□□□□□ -2.38
USH2AO75445 AC097463.2-201ENST00000421074 142 ntBASIC0.2□□□□□ -2.38
USH2AO75445 AC114737.2-201ENST00000421583 173 ntBASIC0.2□□□□□ -2.38
USH2AO75445 MTND4LP11-201ENST00000422184 280 ntBASIC0.2□□□□□ -2.38
USH2AO75445 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms