Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.39□□□□□ -2.03
RIPK2O43353 AC107081.1-201ENST00000414975 361 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 NPM1P11-201ENST00000417106 855 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 ZNF90P2-204ENST00000419323 1075 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.39□□□□□ -2.03
RIPK2O43353 AC104651.1-201ENST00000427559 735 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AL035407.1-201ENST00000429211 571 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 MTND1P20-201ENST00000430341 950 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 RPL23AP83-201ENST00000434984 473 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 UBE2D3P1-201ENST00000436669 444 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 RSU1P2-202ENST00000437884 485 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AC005094.1-201ENST00000440420 368 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 PGBD4P3-201ENST00000440731 581 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.39□□□□□ -2.03
RIPK2O43353 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.39□□□□□ -2.03
RIPK2O43353 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.39□□□□□ -2.03
RIPK2O43353 AL441985.1-201ENST00000457727 251 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 MTCO2P6-201ENST00000463134 685 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.39□□□□□ -2.03
RIPK2O43353 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AC080014.1-201ENST00000496877 1201 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.39□□□□□ -2.03
RIPK2O43353 MRPS33P3-201ENST00000513456 322 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RIPK2O43353 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.39□□□□□ -2.03
RIPK2O43353 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.39□□□□□ -2.03
RIPK2O43353 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.39□□□□□ -2.03
RIPK2O43353 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.39□□□□□ -2.03
RIPK2O43353 AP000811.1-201ENST00000603803 651 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 DPPA3P3-201ENST00000603842 430 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.39□□□□□ -2.03
RIPK2O43353 AL360219.1-201ENST00000610230 366 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AC096577.2-201ENST00000611455 153 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.39□□□□□ -2.03
RIPK2O43353 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
RIPK2O43353 AL031667.3-201ENST00000620124 655 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 AC097520.1-201ENST00000624435 385 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 MIR1291-201ENST00000627649 87 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 UBE2L2-201ENST00000254302 429 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 RNU6-1284P-201ENST00000363701 100 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 Y_RNA.302-201ENST00000364997 102 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 RNA5SP88-201ENST00000365560 109 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RIPK2O43353 AL139397.2-201ENST00000404529 772 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AL355497.1-201ENST00000406262 551 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 RN7SKP158-201ENST00000410453 326 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 AL445669.1-201ENST00000426743 755 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.38□□□□□ -2.03
RIPK2O43353 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 Z98742.2-201ENST00000431564 187 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.38□□□□□ -2.03
RIPK2O43353 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.38□□□□□ -2.03
RIPK2O43353 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 AC068587.2-201ENST00000478386 781 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC011825.1-201ENST00000484967 388 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 RPS3AP22-201ENST00000488297 769 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 SNORA31.3-201ENST00000516029 96 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.38□□□□□ -2.03
RIPK2O43353 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RIPK2O43353 AC087276.1-201ENST00000529659 480 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 AL121821.2-201ENST00000556081 394 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.38□□□□□ -2.03
RIPK2O43353 AC145350.1-201ENST00000567426 208 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC018638.7-201ENST00000605836 1114 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RIPK2O43353 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.38□□□□□ -2.03
RIPK2O43353 AC072039.2-201ENST00000608883 439 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 MIR6840-201ENST00000611937 71 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC244517.12-201ENST00000623581 663 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 AC019226.2-201ENST00000625973 424 ntBASIC2.38□□□□□ -2.03
RIPK2O43353 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIPK2O43353 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIPK2O43353 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
RIPK2O43353 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RIPK2O43353 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RIPK2O43353 RNU6-253P-201ENST00000384730 105 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 MIR34A-201ENST00000385130 110 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 MIR1305-201ENST00000408300 86 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 RNU2-52P-201ENST00000410680 190 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.37□□□□□ -2.03
RIPK2O43353 AC093106.2-201ENST00000428212 385 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.37□□□□□ -2.03
RIPK2O43353 UBE2FP3-201ENST00000436366 524 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.37□□□□□ -2.03
RIPK2O43353 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.37□□□□□ -2.03
RIPK2O43353 ART2BP-201ENST00000453501 499 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.37□□□□□ -2.03
RIPK2O43353 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.37□□□□□ -2.03
RIPK2O43353 RPF2P2-201ENST00000504693 896 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 AF213884.2-201ENST00000510417 903 ntBASIC2.37□□□□□ -2.03
RIPK2O43353 AC026436.1-201ENST00000510537 270 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms