Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.5□□□□□ -1.69
SRGAP3O43295 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 RNU6-784P-201ENST00000384330 106 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 Y_RNA.493-201ENST00000384422 102 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RNU6-393P-201ENST00000384475 107 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RNU6-328P-201ENST00000390887 106 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 SNORA75.6-201ENST00000391318 127 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 AL138878.1-201ENST00000405131 347 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 MTHFD2P2-201ENST00000407725 247 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 Y_RNA.594-201ENST00000410373 140 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RNU6-1050P-201ENST00000410388 107 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.5□□□□□ -1.69
SRGAP3O43295 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.5□□□□□ -1.69
SRGAP3O43295 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.5□□□□□ -1.69
SRGAP3O43295 AC091286.1-201ENST00000431233 461 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 AC236972.1-201ENST00000433225 199 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RNU7-167P-201ENST00000459160 62 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RN7SL93P-201ENST00000463035 293 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 AC128713.1-201ENST00000471495 306 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.5□□□□□ -1.69
SRGAP3O43295 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.5□□□□□ -1.69
SRGAP3O43295 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 SNORA14.1-201ENST00000516113 141 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RN7SKP83-201ENST00000516512 178 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 SNORA70.18-201ENST00000516696 98 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 RNU6-323P-201ENST00000521915 107 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 AC100870.1-201ENST00000522035 505 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 AC023442.1-201ENST00000531247 422 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 KLKP1-201ENST00000595979 403 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.5□□□□□ -1.69
SRGAP3O43295 TUG1_2.1-201ENST00000614234 87 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.5□□□□□ -1.69
SRGAP3O43295 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 SAGE4P-201ENST00000442271 3381 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
SRGAP3O43295 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SRGAP3O43295 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.5□□□□□ -1.69
SRGAP3O43295 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.5□□□□□ -1.69
SRGAP3O43295 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SRGAP3O43295 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.49□□□□□ -1.69
SRGAP3O43295 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
SRGAP3O43295 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.49□□□□□ -1.69
SRGAP3O43295 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.49□□□□□ -1.69
SRGAP3O43295 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SRGAP3O43295 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SRGAP3O43295 RNU6-989P-201ENST00000362756 107 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 RNU1-18P-201ENST00000363062 164 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 RNU6-238P-201ENST00000363313 106 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 SET-203ENST00000372688 801 ntTSL 2 BASIC4.49□□□□□ -1.69
SRGAP3O43295 RNU6-128P-201ENST00000383976 107 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 Y_RNA.455-201ENST00000384230 98 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 Y_RNA.476-201ENST00000384347 108 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 SNORA48.7-201ENST00000391302 135 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AL139039.1-201ENST00000401900 692 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AL583834.1-201ENST00000406943 343 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 DPH3P2-201ENST00000422618 250 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 RPS26P47-201ENST00000427219 348 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 Z98949.2-201ENST00000440996 144 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 MTCO3P45-201ENST00000443036 613 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AL162389.1-201ENST00000449233 177 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 CECR9-201ENST00000453421 199 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AC117503.1-201ENST00000472241 394 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AC106707.2-201ENST00000484182 374 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AP001086.1-201ENST00000494882 321 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AC110794.1-201ENST00000505816 425 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.49□□□□□ -1.69
SRGAP3O43295 AC026782.1-201ENST00000512952 449 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SRGAP3O43295 AC026801.2-201ENST00000515352 425 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 RNU6-390P-201ENST00000516259 103 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 RNU6-1069P-201ENST00000516612 133 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 RNU6-699P-201ENST00000517081 110 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AC008489.1-201ENST00000524271 483 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.49□□□□□ -1.69
SRGAP3O43295 AC018462.2-201ENST00000605375 395 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.49□□□□□ -1.69
SRGAP3O43295 AC110801.1-201ENST00000623590 212 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AC009093.8-201ENST00000641769 292 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 AL161912.2-201ENST00000565707 3007 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.49□□□□□ -1.69
SRGAP3O43295 AC073073.2-201ENST00000609827 2578 ntBASIC4.49□□□□□ -1.69
SRGAP3O43295 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
SRGAP3O43295 AL359893.1-201ENST00000447628 1580 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.48□□□□□ -1.69
SRGAP3O43295 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.48□□□□□ -1.69
SRGAP3O43295 DDX10P1-201ENST00000448545 1933 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRGAP3O43295 RNU6-715P-201ENST00000365204 103 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 SNORA63.7-201ENST00000365579 123 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SRGAP3O43295 RNU6-434P-201ENST00000384376 107 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 RNU6-306P-201ENST00000384617 107 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 Y_RNA.574-201ENST00000384766 95 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 MIR200C-201ENST00000384980 68 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms