Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.63□□□□□ -1.83
PHGDHO43175 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.63□□□□□ -1.83
PHGDHO43175 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
PHGDHO43175 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.62□□□□□ -1.83
PHGDHO43175 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.62□□□□□ -1.83
PHGDHO43175 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.62□□□□□ -1.83
PHGDHO43175 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PHGDHO43175 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PHGDHO43175 SNORD113-7-201ENST00000363762 77 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 Y_RNA.414-201ENST00000384011 101 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 Y_RNA.480-201ENST00000384364 102 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 MIR184-201ENST00000384962 84 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PHGDHO43175 RNU6-1009P-201ENST00000390996 107 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AL353621.1-201ENST00000418219 243 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 HMGN2P30-201ENST00000423237 256 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.62□□□□□ -1.83
PHGDHO43175 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.62□□□□□ -1.83
PHGDHO43175 MTCO3P46-201ENST00000425787 232 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.62□□□□□ -1.83
PHGDHO43175 RPL23AP14-201ENST00000468281 468 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.62□□□□□ -1.83
PHGDHO43175 RNU4-49P-201ENST00000516080 140 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 RN7SKP256-201ENST00000517201 314 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.62□□□□□ -1.83
PHGDHO43175 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.62□□□□□ -1.83
PHGDHO43175 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.62□□□□□ -1.83
PHGDHO43175 HIGD1AP1-201ENST00000550979 275 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.62□□□□□ -1.83
PHGDHO43175 RN7SL703P-201ENST00000578485 302 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.62□□□□□ -1.83
PHGDHO43175 AC007938.3-201ENST00000604965 623 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AC002044.1-201ENST00000606707 158 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AC069234.5-201ENST00000611056 416 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AL121757.2-201ENST00000611223 313 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AC005344.1-201ENST00000613391 459 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AL354798.1-201ENST00000622505 329 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AC005858.4-201ENST00000623191 700 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 U6.99-201ENST00000637524 83 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AL732372.2-225ENST00000642124 456 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PHGDHO43175 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PHGDHO43175 MAPK10-372ENST00000641954 3413 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PHGDHO43175 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PHGDHO43175 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PHGDHO43175 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.62□□□□□ -1.83
PHGDHO43175 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PHGDHO43175 AC007256.1-201ENST00000392253 2765 ntBASIC3.62□□□□□ -1.83
PHGDHO43175 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PHGDHO43175 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PHGDHO43175 RNU6-1252P-201ENST00000363054 104 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 RNU6-884P-201ENST00000363889 107 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 RNU6-270P-201ENST00000364131 105 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 RN7SKP280-201ENST00000364196 304 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 RNA5SP42-201ENST00000364278 115 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 SNORA57.3-201ENST00000411095 141 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 RNU6-607P-201ENST00000411283 108 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 NDUFB4P5-201ENST00000415445 361 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 RPL7P10-201ENST00000417407 739 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.61□□□□□ -1.83
PHGDHO43175 AC098614.2-201ENST00000426040 255 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 NDUFA5P4-201ENST00000436704 385 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.61□□□□□ -1.83
PHGDHO43175 HMGB3P8-201ENST00000449709 577 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 AL583843.1-201ENST00000456070 346 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 RNU7-66P-201ENST00000459469 62 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 SNORA14.1-201ENST00000516113 141 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 MIR892C-201ENST00000516410 77 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 AC090136.1-201ENST00000520009 240 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.61□□□□□ -1.83
PHGDHO43175 H3F3AP1-201ENST00000559984 334 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 LRRC37A5P-203ENST00000580181 585 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 AL355598.1-201ENST00000604169 202 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PHGDHO43175 AC025253.1-201ENST00000613623 543 ntBASIC3.61□□□□□ -1.83
PHGDHO43175 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
PHGDHO43175 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PHGDHO43175 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PHGDHO43175 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHGDHO43175 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHGDHO43175 AP001148.1-201ENST00000624124 2359 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PHGDHO43175 Y_RNA.166-201ENST00000363730 102 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RNU6-266P-201ENST00000364225 107 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RNU6-831P-201ENST00000384548 107 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 SNORA40C-201ENST00000391285 128 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 MIR888-201ENST00000401186 77 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RAP1BP3-201ENST00000407180 549 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 MTHFD2P2-201ENST00000407725 247 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RNA5SP38-201ENST00000410750 119 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 Y_RNA.623-201ENST00000411128 95 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 MTND3P8-201ENST00000412909 339 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.6□□□□□ -1.83
PHGDHO43175 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.6□□□□□ -1.83
PHGDHO43175 AC099548.1-201ENST00000421443 426 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 AL353678.1-201ENST00000422735 741 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 AC006989.1-201ENST00000427212 131 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms