Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC107399.1-201ENST00000451226 265 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 RNU7-66P-201ENST00000459469 62 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXN1O15353 RN7SL283P-201ENST00000489055 303 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AC055855.1-201ENST00000489563 579 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.08□□□□□ -1.76
FOXN1O15353 AP006245.1-201ENST00000522549 120 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.08□□□□□ -1.76
FOXN1O15353 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXN1O15353 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.08□□□□□ -1.76
FOXN1O15353 AC026470.2-201ENST00000561492 181 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXN1O15353 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXN1O15353 MIR4425-201ENST00000580572 84 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 MIR4512-201ENST00000583257 77 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AL121992.2-201ENST00000606262 256 ntBASIC4.08□□□□□ -1.76
FOXN1O15353 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FOXN1O15353 AC004972.1-201ENST00000623934 2209 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN1O15353 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
FOXN1O15353 AP001350.1-201ENST00000601906 1524 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN1O15353 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN1O15353 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
FOXN1O15353 MIR423-201ENST00000362201 94 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 Y_RNA.22-201ENST00000362492 102 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 Y_RNA.112-201ENST00000363250 102 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 RNU5E-8P-201ENST00000363502 116 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 U3.12-201ENST00000364498 214 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXN1O15353 RNU6-1013P-201ENST00000384180 107 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 MIR649-201ENST00000384843 97 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 RNU6-903P-201ENST00000391270 109 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 MTHFD2P2-201ENST00000407725 247 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 RPS12P24-201ENST00000412619 387 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AL133384.1-201ENST00000412744 351 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AL513477.1-202ENST00000417061 214 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN1O15353 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN1O15353 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN1O15353 AL160004.2-201ENST00000432935 350 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 RPS20P1-201ENST00000434853 354 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXN1O15353 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN1O15353 AC133473.1-201ENST00000455173 299 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 BTF3P15-201ENST00000455606 336 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AL583843.1-201ENST00000456070 346 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AL136097.1-201ENST00000456945 913 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AP000893.1-201ENST00000474462 794 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN1O15353 RNU6-1038P-201ENST00000516516 104 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AP005435.4-201ENST00000529514 284 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN1O15353 MIR4680-201ENST00000580906 66 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 AC105224.1-201ENST00000587055 421 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 NUTF2P8-201ENST00000604593 363 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 OR6R2P-201ENST00000609216 300 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN1O15353 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 MIR6864-201ENST00000617935 70 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 U4.1-201ENST00000620349 87 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.07□□□□□ -1.76
FOXN1O15353 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN1O15353 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
FOXN1O15353 SAGE4P-201ENST00000442271 3381 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXN1O15353 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN1O15353 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN1O15353 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN1O15353 RNU6-28P-201ENST00000362378 107 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 RNU6-552P-201ENST00000362869 119 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 Y_RNA.530-201ENST00000384587 101 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 MT-TG-201ENST00000387429 68 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AL606923.1-201ENST00000406616 190 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 Z98941.1-201ENST00000407764 100 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN1O15353 RPL37P10-201ENST00000412884 288 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC074085.1-201ENST00000413598 418 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 RAC1P3-201ENST00000416129 580 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXN1O15353 RPL31P12-201ENST00000422587 358 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.06□□□□□ -1.76
FOXN1O15353 RPS29P15-201ENST00000458329 171 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 RPL23AP41-201ENST00000484754 458 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 HMGB1P30-201ENST00000492455 606 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXN1O15353 AC110794.1-201ENST00000505816 425 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC092436.1-201ENST00000506450 503 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC091885.1-201ENST00000506658 268 ntBASIC4.06□□□□□ -1.76
FOXN1O15353 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN1O15353 RN7SKP295-201ENST00000517264 153 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms