Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC093831.2-201ENST00000624393 3427 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 AL136360.1-201ENST00000503377 1900 ntBASIC3.23□□□□□ -1.89
ATP2A1O14983 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A1O14983 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ATP2A1O14983 AC092435.3-201ENST00000565538 3654 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A1O14983 Y_RNA.22-201ENST00000362492 102 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 RNU6-181P-201ENST00000363225 107 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 RNU6-1097P-201ENST00000363586 107 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 RN7SKP226-201ENST00000364912 300 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 Y_RNA.296-201ENST00000364930 108 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 RNU6-282P-201ENST00000365357 103 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ATP2A1O14983 RNU6-1103P-201ENST00000384150 107 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 GSTA9P-201ENST00000406231 611 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.22□□□□□ -1.89
ATP2A1O14983 TMEM167AP1-201ENST00000423409 219 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 RPL36AP6-201ENST00000435770 321 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 MTND1P34-201ENST00000438556 671 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A1O14983 AC013267.1-201ENST00000458227 267 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 HMGB1P29-201ENST00000505659 499 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 AC006445.2-201ENST00000510061 472 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.22□□□□□ -1.89
ATP2A1O14983 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 RNU6-445P-201ENST00000516949 107 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
ATP2A1O14983 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.22□□□□□ -1.89
ATP2A1O14983 AC245505.1-201ENST00000556398 224 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.22□□□□□ -1.89
ATP2A1O14983 EIF1P4-201ENST00000572664 335 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 DPPA3P3-201ENST00000603842 430 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 AC004832.5-201ENST00000608677 401 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
ATP2A1O14983 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A1O14983 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A1O14983 AC008264.2-201ENST00000610193 3731 ntBASIC3.22□□□□□ -1.89
ATP2A1O14983 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
ATP2A1O14983 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.22□□□□□ -1.89
ATP2A1O14983 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.22□□□□□ -1.89
ATP2A1O14983 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
ATP2A1O14983 MTND5P29-201ENST00000458676 1807 ntBASIC3.21□□□□□ -1.89
ATP2A1O14983 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.9
ATP2A1O14983 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATP2A1O14983 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ATP2A1O14983 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ATP2A1O14983 RNU1-112P-201ENST00000364401 164 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 SNORA14A-201ENST00000364773 135 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 SMIM11P1-201ENST00000369586 178 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 FAT1P1-201ENST00000406588 507 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 RNU2-33P-201ENST00000410344 192 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 RNU2-39P-201ENST00000410604 198 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A1O14983 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATP2A1O14983 AC104651.1-201ENST00000427559 735 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 NEFMP1-201ENST00000443423 1006 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A1O14983 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.21□□□□□ -1.9
ATP2A1O14983 RNA5SP310-201ENST00000459084 116 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 AC087588.1-201ENST00000462203 316 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 RPL7P5-201ENST00000471472 736 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
ATP2A1O14983 AC007182.2-201ENST00000489251 402 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A1O14983 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.21□□□□□ -1.9
ATP2A1O14983 AC098848.2-201ENST00000588023 330 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 AC073534.2-201ENST00000620377 381 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 AL589994.2-201ENST00000621124 579 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 AC010338.1-201ENST00000621823 717 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 OR5AK4P-201ENST00000635912 903 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATP2A1O14983 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATP2A1O14983 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATP2A1O14983 AC007785.2-201ENST00000598627 1916 ntBASIC3.21□□□□□ -1.9
ATP2A1O14983 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP2A1O14983 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATP2A1O14983 RNU1-35P-201ENST00000362782 153 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATP2A1O14983 RNU6-817P-201ENST00000391083 104 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AL592148.1-201ENST00000413568 445 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.2□□□□□ -1.9
ATP2A1O14983 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.2□□□□□ -1.9
ATP2A1O14983 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.2□□□□□ -1.9
ATP2A1O14983 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC073464.1-201ENST00000429823 534 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.2□□□□□ -1.9
ATP2A1O14983 AC093392.2-201ENST00000450682 337 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC022364.2-201ENST00000457963 554 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC104472.2-201ENST00000469035 601 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 RN7SL429P-201ENST00000479090 223 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.2□□□□□ -1.9
ATP2A1O14983 RN7SL489P-201ENST00000486185 223 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 RN7SL327P-201ENST00000488659 223 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC023194.1-201ENST00000493084 308 ntBASIC3.2□□□□□ -1.9
ATP2A1O14983 AC107401.1-201ENST00000503426 685 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms