Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.7□□□□□ -1.98
E2F3O00716 AC138749.5-201ENST00000611461 208 ntBASIC2.7□□□□□ -1.98
E2F3O00716 AC116165.2-201ENST00000616705 206 ntBASIC2.7□□□□□ -1.98
E2F3O00716 AC108479.2-201ENST00000617314 601 ntBASIC2.7□□□□□ -1.98
E2F3O00716 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.7□□□□□ -1.98
E2F3O00716 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
E2F3O00716 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
E2F3O00716 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
E2F3O00716 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
E2F3O00716 RNU6-884P-201ENST00000363889 107 ntBASIC2.69□□□□□ -1.98
E2F3O00716 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
E2F3O00716 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.69□□□□□ -1.98
E2F3O00716 MIR888-201ENST00000401186 77 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 HMGN1P14-201ENST00000412459 517 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AL139413.1-201ENST00000421309 217 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.69□□□□□ -1.98
E2F3O00716 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.69□□□□□ -1.98
E2F3O00716 RPL32P28-201ENST00000443577 397 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 DPPA3P1-201ENST00000448050 469 ntBASIC2.69□□□□□ -1.98
E2F3O00716 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.69□□□□□ -1.98
E2F3O00716 AL109933.2-201ENST00000452651 260 ntBASIC2.69□□□□□ -1.98
E2F3O00716 GSTA11P-201ENST00000452866 669 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 RPL26P9-201ENST00000457466 433 ntBASIC2.69□□□□□ -1.98
E2F3O00716 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 snoU109.1-201ENST00000459339 135 ntBASIC2.69□□□□□ -1.98
E2F3O00716 RPS27AP9-201ENST00000477681 438 ntBASIC2.69□□□□□ -1.98
E2F3O00716 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.69□□□□□ -1.98
E2F3O00716 RPL9P33-201ENST00000484311 566 ntBASIC2.69□□□□□ -1.98
E2F3O00716 RPS29P20-201ENST00000489592 171 ntBASIC2.69□□□□□ -1.98
E2F3O00716 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
E2F3O00716 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 MTND4P2-201ENST00000507767 1203 ntBASIC2.69□□□□□ -1.98
E2F3O00716 NDUFB4P2-201ENST00000509515 391 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
E2F3O00716 RPL21P5-201ENST00000554662 472 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.69□□□□□ -1.98
E2F3O00716 MIR3146-201ENST00000580367 79 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AC005771.1-201ENST00000585581 349 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AC009977.1-201ENST00000586015 570 ntBASIC2.69□□□□□ -1.98
E2F3O00716 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.69□□□□□ -1.98
E2F3O00716 AC087752.4-201ENST00000605911 462 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AL391813.2-201ENST00000609113 322 ntBASIC2.69□□□□□ -1.98
E2F3O00716 CR381653.2-201ENST00000624041 768 ntBASIC2.69□□□□□ -1.98
E2F3O00716 AC090582.1-201ENST00000636321 199 ntBASIC2.69□□□□□ -1.98
E2F3O00716 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
E2F3O00716 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.69□□□□□ -1.98
E2F3O00716 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.69□□□□□ -1.98
E2F3O00716 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
E2F3O00716 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
E2F3O00716 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
E2F3O00716 AL359693.1-201ENST00000614959 2407 ntBASIC2.68□□□□□ -1.98
E2F3O00716 RNU4-82P-201ENST00000362443 140 ntBASIC2.68□□□□□ -1.98
E2F3O00716 Y_RNA.51-201ENST00000362725 102 ntBASIC2.68□□□□□ -1.98
E2F3O00716 RNU5A-8P-201ENST00000364102 114 ntBASIC2.68□□□□□ -1.98
E2F3O00716 RNU1-138P-201ENST00000384093 164 ntBASIC2.68□□□□□ -1.98
E2F3O00716 Y_RNA.553-201ENST00000384670 102 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AL512633.1-201ENST00000399931 655 ntBASIC2.68□□□□□ -1.98
E2F3O00716 RPS4XP8-201ENST00000402039 771 ntBASIC2.68□□□□□ -1.98
E2F3O00716 BTF3L4P3-201ENST00000418879 476 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC006366.1-201ENST00000422002 759 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.68□□□□□ -1.98
E2F3O00716 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.68□□□□□ -1.98
E2F3O00716 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
E2F3O00716 AC010153.1-201ENST00000432862 727 ntBASIC2.68□□□□□ -1.98
E2F3O00716 RPS20P5-201ENST00000434808 360 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.68□□□□□ -1.98
E2F3O00716 TIMM9P1-201ENST00000436122 256 ntBASIC2.68□□□□□ -1.98
E2F3O00716 RPS15AP5-201ENST00000436276 388 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.68□□□□□ -1.98
E2F3O00716 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.68□□□□□ -1.98
E2F3O00716 MTCO3P45-201ENST00000443036 613 ntBASIC2.68□□□□□ -1.98
E2F3O00716 MRPL50P4-201ENST00000446432 475 ntBASIC2.68□□□□□ -1.98
E2F3O00716 MTND1P27-201ENST00000451117 902 ntBASIC2.68□□□□□ -1.98
E2F3O00716 SSXP1-201ENST00000453640 473 ntBASIC2.68□□□□□ -1.98
E2F3O00716 MTND1P3-201ENST00000484956 952 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC105252.1-201ENST00000503089 286 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.68□□□□□ -1.98
E2F3O00716 RNU1-104P-201ENST00000517280 175 ntBASIC2.68□□□□□ -1.98
E2F3O00716 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.68□□□□□ -1.98
E2F3O00716 AP003181.2-201ENST00000528941 181 ntBASIC2.68□□□□□ -1.98
E2F3O00716 DEFB108A-201ENST00000530110 222 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.68□□□□□ -1.98
E2F3O00716 CYCSP39-201ENST00000565821 309 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC040904.1-201ENST00000590850 223 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AC008277.2-201ENST00000605196 797 ntBASIC2.68□□□□□ -1.98
E2F3O00716 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AL603839.4-201ENST00000624658 1005 ntBASIC2.68□□□□□ -1.98
E2F3O00716 AL136313.1-201ENST00000624804 202 ntBASIC2.68□□□□□ -1.98
E2F3O00716 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
E2F3O00716 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
E2F3O00716 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.68□□□□□ -1.98
E2F3O00716 AL390237.1-201ENST00000404226 1415 ntBASIC2.68□□□□□ -1.98
E2F3O00716 RNY4P16-201ENST00000364768 94 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms