Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC009233.1-201ENST00000616477 371 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AC024581.2-201ENST00000619986 252 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AC019226.1-201ENST00000625666 515 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AP005901.5-201ENST00000545779 1796 ntBASIC1.31□□□□□ -2.2
SDCBPO00560 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 RNU1-72P-201ENST00000362976 153 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 RNU6-359P-201ENST00000365466 108 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SDCBPO00560 NDUFS5P4-201ENST00000412983 318 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 ELOCP14-201ENST00000428070 331 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 ZYG11AP1-201ENST00000430329 837 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.3□□□□□ -2.2
SDCBPO00560 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.3□□□□□ -2.2
SDCBPO00560 ELOCP7-201ENST00000439968 331 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 BTBD7P2-201ENST00000441962 620 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.3□□□□□ -2.2
SDCBPO00560 USP9YP10-201ENST00000454868 628 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 RPL18AP17-201ENST00000455326 198 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.3□□□□□ -2.2
SDCBPO00560 AC093801.2-201ENST00000503966 1050 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.3□□□□□ -2.2
SDCBPO00560 MTCYBP16-201ENST00000509187 1129 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AC008837.1-201ENST00000511513 412 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.3□□□□□ -2.2
SDCBPO00560 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.3□□□□□ -2.2
SDCBPO00560 RNU6-583P-201ENST00000516012 92 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 RNA5SP290-201ENST00000517133 127 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AC012435.1-202ENST00000568772 240 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 ROCK1P1-201ENST00000573767 549 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 MIR3126-201ENST00000577443 74 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.3□□□□□ -2.2
SDCBPO00560 AC078899.2-201ENST00000595282 212 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AL138963.2-201ENST00000605137 226 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AC239868.4-201ENST00000608318 671 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 TUG1_2.1-201ENST00000614234 87 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AL357080.1-201ENST00000617394 239 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 U4atac.1-201ENST00000618345 95 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AP002791.1-201ENST00000623291 381 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 AP003400.5-201ENST00000624827 617 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 MIR4275-201ENST00000636486 87 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SDCBPO00560 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
SDCBPO00560 CDR1-202ENST00000625883 1485 ntBASIC1.3□□□□□ -2.2
SDCBPO00560 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.29□□□□□ -2.2
SDCBPO00560 MTND5P10-201ENST00000603719 1809 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 U8.3-201ENST00000363321 132 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 RNU4-42P-201ENST00000364738 142 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 RNU6-748P-201ENST00000384648 107 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 CCNG1P1-201ENST00000406783 885 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 MIR1289-2-201ENST00000408360 111 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 BX510359.4-201ENST00000423750 193 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 RPL17P35-201ENST00000432217 549 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 AL360221.1-201ENST00000445989 335 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 RN7SL429P-201ENST00000479090 223 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 RN7SL489P-201ENST00000486185 223 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 RN7SL327P-201ENST00000488659 223 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AL160314.1-201ENST00000490836 438 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 RNY4P37-201ENST00000516225 96 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.29□□□□□ -2.2
SDCBPO00560 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SDCBPO00560 CBX3P4-201ENST00000538909 354 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AC006199.1-201ENST00000548728 219 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 SNRPGP1-201ENST00000553864 222 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.29□□□□□ -2.2
SDCBPO00560 AC021739.1-201ENST00000559631 174 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AC233702.2-202ENST00000562547 291 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AC021171.1-201ENST00000603137 706 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 RN7SL853P-201ENST00000617250 223 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 AC093875.1-201ENST00000623688 504 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 ADAM3A-203ENST00000461344 2157 ntBASIC1.29□□□□□ -2.2
SDCBPO00560 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SDCBPO00560 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
SDCBPO00560 RNU6-754P-201ENST00000391166 107 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 HMGN2P39-201ENST00000398005 273 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AL356421.1-201ENST00000403255 413 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 TXNP7-201ENST00000406296 293 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.28□□□□□ -2.2
SDCBPO00560 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.28□□□□□ -2.2
SDCBPO00560 BTF3L4P3-201ENST00000418879 476 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AL358453.1-201ENST00000422522 250 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SDCBPO00560 HSPE1P21-201ENST00000438283 308 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 PTGES3P1-201ENST00000439531 483 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AC007677.1-201ENST00000445757 515 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
SDCBPO00560 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms