Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FOXN3O00409 SNORA48.7-201ENST00000391302 135 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXN3O00409 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN3O00409 SNRPEP10-201ENST00000420249 274 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.71□□□□□ -1.82
FOXN3O00409 TRIAP1P1-201ENST00000427062 225 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 RPL21P40-201ENST00000428586 483 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC007389.2-201ENST00000434630 306 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC098614.3-201ENST00000438957 440 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AMD1P1-201ENST00000457220 922 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC091153.1-201ENST00000466297 402 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC106707.2-201ENST00000484182 374 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC139453.3-201ENST00000493276 369 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXN3O00409 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.71□□□□□ -1.82
FOXN3O00409 RNU4-29P-201ENST00000515943 174 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 SUB1P1-201ENST00000524415 382 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN3O00409 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXN3O00409 FGF7P1-201ENST00000582820 288 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC136601.2-201ENST00000604356 474 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 SNORD39.4-201ENST00000620099 78 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AC039056.2-201ENST00000622261 511 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AL513302.2-201ENST00000562313 1842 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 MFSD8-233ENST00000641482 4860 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN3O00409 AC004972.1-201ENST00000623934 2209 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXN3O00409 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN3O00409 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXN3O00409 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXN3O00409 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXN3O00409 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXN3O00409 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
FOXN3O00409 CBX3P1-201ENST00000325243 554 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 Y_RNA.61-201ENST00000362835 102 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AL359837.1-201ENST00000381357 287 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 Y_RNA.534-201ENST00000384599 112 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 SNORA1.3-201ENST00000384676 136 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 MIR184-201ENST00000384962 84 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 MIR301A-201ENST00000385261 86 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 SAR1AP2-201ENST00000392696 594 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AL445189.1-201ENST00000405722 338 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 RNU2-68P-201ENST00000410878 191 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 RPL21P111-201ENST00000418453 477 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXN3O00409 CALM1P1-201ENST00000442082 433 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXN3O00409 RPS24P13-201ENST00000442520 397 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXN3O00409 AL590664.1-201ENST00000448065 339 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 RPS29P25-201ENST00000481709 171 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AC006483.1-201ENST00000487308 313 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 SLC25A15P5-201ENST00000508033 253 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 RNU6-1038P-201ENST00000516516 104 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 TRMT10BP1-201ENST00000519377 943 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXN3O00409 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXN3O00409 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
FOXN3O00409 AC006130.2-201ENST00000586202 326 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AC010525.2-201ENST00000590920 195 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AL133393.1-201ENST00000603277 287 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 HSPE1P7-201ENST00000604681 321 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXN3O00409 DISC2.1-201ENST00000612827 205 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXN3O00409 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXN3O00409 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXN3O00409 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXN3O00409 HSPA8P4-201ENST00000511877 1920 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 AC032011.1-201ENST00000611703 1549 ntBASIC3.7□□□□□ -1.82
FOXN3O00409 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN3O00409 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN3O00409 AC103988.1-201ENST00000566382 2177 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN3O00409 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN3O00409 AC058791.1-201ENST00000608412 3198 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 AL139276.1-201ENST00000311910 1001 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 RNY3P3-201ENST00000363816 102 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 SNORA73.2-201ENST00000364946 201 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
FOXN3O00409 RNU2-41P-201ENST00000410991 178 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 BX323014.1-201ENST00000412876 237 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXN3O00409 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXN3O00409 GOT2P5-201ENST00000433995 546 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 SNRPEP9-201ENST00000436794 238 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXN3O00409 FABP5P15-201ENST00000453566 214 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 RPS4XP2-201ENST00000458402 793 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 AC004801.2-202ENST00000463559 283 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 RN7SL542P-201ENST00000467147 294 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 HMGN1P12-201ENST00000499125 195 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXN3O00409 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXN3O00409 RNU6-1282P-201ENST00000516735 96 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 RNU6-1315P-201ENST00000517187 99 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 MTND4P7-201ENST00000523876 130 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms