Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CYCSP48-201ENST00000417124 323 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 EIF1AXP1-201ENST00000419267 435 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 EIF4EP4-201ENST00000424916 578 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AL353729.1-201ENST00000425044 720 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 HMGB1P27-201ENST00000431429 603 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 RPL36AP53-201ENST00000432891 316 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 RNU7-59P-201ENST00000459101 61 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 TRBV1-201ENST00000476502 284 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.79□□□□□ -2.12
UPK1AO00322 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK1AO00322 SNORD19.2-201ENST00000516978 73 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK1AO00322 MRPS36P5-201ENST00000551909 298 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AGGF1P5-201ENST00000567900 919 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 MIR4765-201ENST00000585007 77 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AL596327.1-201ENST00000603629 213 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AC098826.3-201ENST00000603823 466 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK1AO00322 AC007038.2-201ENST00000608095 740 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AC069294.1-201ENST00000608397 350 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK1AO00322 AC107075.1-201ENST00000613695 314 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
UPK1AO00322 AC244517.12-201ENST00000623581 663 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 AC004808.1-201ENST00000627671 721 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 U2.21-201ENST00000637295 81 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 CENPCP1-201ENST00000533085 2578 ntBASIC1.79□□□□□ -2.12
UPK1AO00322 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UPK1AO00322 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK1AO00322 RNU5E-10P-201ENST00000363506 118 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UPK1AO00322 SNORA70B-201ENST00000384210 135 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 RNU6-658P-201ENST00000384606 106 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 AL021407.1-201ENST00000404531 386 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 RNU2-20P-201ENST00000410425 191 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 NPM1P11-201ENST00000417106 855 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.78□□□□□ -2.12
UPK1AO00322 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK1AO00322 FABP5P14-201ENST00000437273 393 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK1AO00322 MTATP6P30-201ENST00000443540 664 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK1AO00322 MTATP6P7-201ENST00000453315 681 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK1AO00322 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK1AO00322 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK1AO00322 RNU1-41P-201ENST00000516161 162 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 RNU1-48P-201ENST00000516400 162 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 AP005902.1-201ENST00000521358 186 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK1AO00322 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK1AO00322 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UPK1AO00322 AC011939.3-201ENST00000613686 466 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 AC025048.6-202ENST00000627667 438 ntBASIC1.78□□□□□ -2.12
UPK1AO00322 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK1AO00322 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
UPK1AO00322 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
UPK1AO00322 RNU6-462P-201ENST00000362659 105 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK1AO00322 MIR147B-201ENST00000390185 80 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK1AO00322 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK1AO00322 BX276092.3-201ENST00000424182 230 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.77□□□□□ -2.13
UPK1AO00322 AC104651.1-201ENST00000427559 735 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 MICF-203ENST00000432679 129 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK1AO00322 MTCO1P27-201ENST00000448269 226 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK1AO00322 AC005410.1-202ENST00000460347 485 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 AC010587.2-201ENST00000511727 448 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 MIR892C-201ENST00000516410 77 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 RN7SKP258-201ENST00000517151 304 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK1AO00322 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.77□□□□□ -2.13
UPK1AO00322 MTCYBP23-201ENST00000558717 1102 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 AC021739.1-201ENST00000559631 174 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.77□□□□□ -2.13
UPK1AO00322 AC005261.5-201ENST00000596280 355 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 AC021171.1-201ENST00000603137 706 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 AC008121.1-201ENST00000603244 268 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 AL161798.1-201ENST00000604630 131 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 SNORD14A-201ENST00000606526 91 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 RNU6-88P-201ENST00000606801 100 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 DUSP12P1-201ENST00000612874 516 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
UPK1AO00322 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.77□□□□□ -2.13
UPK1AO00322 AC110994.2-201ENST00000635481 492 ntBASIC1.77□□□□□ -2.13
UPK1AO00322 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UPK1AO00322 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UPK1AO00322 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
UPK1AO00322 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
UPK1AO00322 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UPK1AO00322 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
UPK1AO00322 UBE2L2-201ENST00000254302 429 ntBASIC1.76□□□□□ -2.13
UPK1AO00322 RNA5SP125-201ENST00000364843 120 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms