Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL136310.1-201ENST00000404926 654 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 MTND2P5-201ENST00000432656 1006 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 UBE2V1P13-201ENST00000436983 439 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 PTGES3P1-201ENST00000439531 483 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AL645638.1-201ENST00000440519 361 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 MTCYBP42-201ENST00000444653 1130 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AL139109.1-201ENST00000455491 297 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 HMGN2P16-201ENST00000456802 261 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 PABPC1P3-201ENST00000469174 459 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 UBE2V1P12-201ENST00000503954 474 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AP001269.3-201ENST00000588718 329 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC106028.5-201ENST00000610332 395 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC009269.6-201ENST00000621778 588 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC013437.2-201ENST00000639587 677 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 ZNF663P-202ENST00000641770 1131 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC011477.1-204ENST00000623416 1325 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 RNA5SP258-201ENST00000362750 119 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 RNA5SP139-201ENST00000364340 117 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 RNU6-952P-201ENST00000391164 108 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC016769.3-201ENST00000396562 315 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 MTCO2P23-201ENST00000425216 680 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AL356867.1-201ENST00000429623 299 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 LSM1P1-201ENST00000438629 273 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 RPL17P49-201ENST00000443728 411 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 UBBP3-201ENST00000445497 241 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 Z96811.1-201ENST00000445880 108 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC104982.1-201ENST00000478775 574 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC093677.1-201ENST00000514414 678 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC007115.1-201ENST00000546853 234 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 HIGD1AP17-201ENST00000554576 276 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC009127.3-201ENST00000570531 403 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC008507.2-201ENST00000588402 1176 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AC099785.1-201ENST00000605697 437 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 AL445264.1-201ENST00000621719 171 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 OR5H6-203ENST00000642105 978 ntBASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
COL6A6A6NMZ7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL079343.1-201ENST00000572358 1771 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 RNU6-1180P-201ENST00000364935 107 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 RNU2-47P-201ENST00000410649 186 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MTND1P21-201ENST00000412991 285 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 SNRPEP4-201ENST00000435815 279 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL121871.1-201ENST00000443413 436 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL360221.1-201ENST00000445989 335 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 SNORD121B-201ENST00000458838 81 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MIR4509-3-201ENST00000578671 94 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MIR4509-2-201ENST00000583920 94 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC105224.1-201ENST00000587055 421 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL590095.2-201ENST00000604136 117 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MIR6840-201ENST00000611937 71 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 MIR4509-1-201ENST00000618224 94 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 SGO1P2-201ENST00000429458 1589 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL356473.1-201ENST00000406203 1408 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 ZNF29P-201ENST00000225587 168 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 RNU6-878P-201ENST00000384578 110 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 RNU6-1000P-201ENST00000391066 106 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL161449.1-201ENST00000414531 1199 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL591704.1-201ENST00000432574 275 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 SNRPGP13-201ENST00000442212 177 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms