Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SAR1AP4-201ENST00000429225 591 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 SNAP23P1-201ENST00000433229 246 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC069113.1-201ENST00000517763 267 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 COPS8P3-201ENST00000526024 482 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 CASP1P1-201ENST00000526345 212 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC069240.1-201ENST00000548774 375 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 TRAV37-201ENST00000553906 342 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC100830.2-201ENST00000581636 240 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC044792.1-201ENST00000593294 196 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC008638.3-201ENST00000603341 463 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AL670379.10-201ENST00000604330 253 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AL670379.9-201ENST00000605428 253 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC002044.1-201ENST00000606707 158 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 MIR7106-201ENST00000612419 65 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC007546.2-201ENST00000623996 360 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 AC119674.1-207ENST00000641355 633 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC85CA6NKD9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
CCDC85CA6NKD9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC85CA6NKD9 VDAC1P9-201ENST00000412766 841 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AL139396.1-201ENST00000421137 167 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AL512844.2-201ENST00000433990 593 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 SNRPEP9-201ENST00000436794 238 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 CECR9-201ENST00000453421 199 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 S100A11P2-201ENST00000467589 312 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 MTND5P5-201ENST00000503764 376 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AC008526.1-201ENST00000509149 338 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 TBCAP3-201ENST00000512475 312 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 RNU1-61P-201ENST00000516107 151 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 RNU2-27P-201ENST00000516185 142 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.682-201ENST00000516457 100 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 ZNF192P1-203ENST00000565888 810 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 AL359922.3-201ENST00000624779 1670 ntBASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC85CA6NKD9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AL035425.3-201ENST00000564206 4996 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 RNA5SP374-201ENST00000362939 125 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 SNORD35B-201ENST00000363660 87 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.384-201ENST00000383909 102 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 RNU6-1179P-201ENST00000384667 107 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 SNORA40C-201ENST00000391285 128 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC074085.1-201ENST00000413598 418 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 ATG3P1-201ENST00000419507 911 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 RPS3AP52-201ENST00000435639 297 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC005019.1-201ENST00000436455 431 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AL359672.1-201ENST00000442302 409 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 RANP8-201ENST00000444720 713 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.635-201ENST00000459041 101 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 RNU7-138P-201ENST00000459479 64 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 HMGN1P13-201ENST00000505795 138 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 RNU1-86P-201ENST00000516108 154 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 RNU1-107P-201ENST00000516617 154 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AP005639.2-201ENST00000527592 928 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 HPRT1P3-201ENST00000539521 576 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC090574.1-201ENST00000623186 233 ntBASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC85CA6NKD9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.431-201ENST00000384086 102 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 MIR1179-201ENST00000408703 91 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 RNU2-68P-201ENST00000410878 191 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 ATP5A1P2-201ENST00000412323 255 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms