Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MIR5092-201ENST00000583139 88 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC002545.1-201ENST00000592511 181 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC073648.5-201ENST00000603502 305 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC006023.1-201ENST00000603944 259 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC091304.9-201ENST00000612091 226 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 HULC.1-201ENST00000612720 240 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC007998.5-201ENST00000622938 237 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC091953.2-201ENST00000623979 160 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC092447.7-201ENST00000422212 1621 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.78□□□□□ -1.97
TRIM49BA6NDI0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 Y_RNA.3-201ENST00000362331 103 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RNU4-1-201ENST00000363925 141 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RNU6-432P-201ENST00000384196 109 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MIR34A-201ENST00000385130 110 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 UBE2V1P2-201ENST00000397758 440 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AL139039.1-201ENST00000401900 692 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 TXNP7-201ENST00000406296 293 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RPS3AP3-201ENST00000411933 242 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 ZNF863P-201ENST00000426746 417 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC009414.1-201ENST00000427200 443 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC007919.1-201ENST00000429380 217 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC104850.1-201ENST00000435940 476 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC092473.1-201ENST00000441098 221 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MTND6P13-201ENST00000443510 523 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RPS20P22-201ENST00000473700 357 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RPL31P41-201ENST00000477967 372 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 KC877373.1-201ENST00000479066 408 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC004924.1-201ENST00000480160 781 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RNA5SP356-201ENST00000515972 94 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 SNORA18.6-201ENST00000516792 115 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RNU6-826P-201ENST00000516827 104 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RNU6-1003P-201ENST00000517099 105 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 SUB1P1-201ENST00000524415 382 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 RPL21P5-201ENST00000554662 472 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MIR3118-1-201ENST00000581787 76 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MIR3670-2-201ENST00000582974 65 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MIR3670-1-201ENST00000584160 65 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MIR3670-3-201ENST00000584855 65 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC005771.1-201ENST00000585581 349 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 TPMTP1-201ENST00000592307 737 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 BNIP3P8-201ENST00000597863 560 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AL355877.2-201ENST00000603670 358 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC112187.2-201ENST00000604345 283 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AL021997.1-201ENST00000605757 193 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC104073.3-201ENST00000610942 955 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC013562.2-201ENST00000611632 603 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MIR3670-4-201ENST00000612260 65 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AL589743.7-201ENST00000612637 233 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC093838.1-201ENST00000613014 469 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC009159.1-201ENST00000618386 642 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC005858.4-201ENST00000623191 700 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 AC110994.2-201ENST00000635481 492 ntBASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM49BA6NDI0 CR848007.1-201ENST00000442354 1699 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 RNU5E-1-201ENST00000362477 120 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 RNU6-217P-201ENST00000384164 104 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 MIR627-201ENST00000384979 97 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 RNU2-16P-201ENST00000410712 136 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 RNA5SP492-201ENST00000411330 114 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 AL663109.1-201ENST00000411498 844 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 MTCO3P41-201ENST00000414801 328 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 AL031779.1-201ENST00000415663 330 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 BX295541.1-201ENST00000417774 250 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 ISCA1P6-201ENST00000427740 390 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 MTND1P34-201ENST00000438556 671 ntBASIC2.76□□□□□ -1.97
TRIM49BA6NDI0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms