Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RPL23AP36-201ENST00000413895 458 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AL929288.2-201ENST00000446368 407 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 ARL2BPP5-201ENST00000523141 481 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 LARP7P2-201ENST00000575306 125 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 BX322635.1-201ENST00000605804 496 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 DUXAP10-204ENST00000612052 616 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 uc_338.14-201ENST00000613162 166 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AL353770.2-201ENST00000620024 78 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AC090617.9-201ENST00000623751 147 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AC104820.1-201ENST00000624183 307 ntBASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.89□□□□□ -2.27
TCRBV3S1A0A5B6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 SNORA7.1-201ENST00000363750 139 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-115P-201ENST00000364310 107 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL139098.1-201ENST00000407291 389 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 RNU2-33P-201ENST00000410344 192 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 OOSP1P1-201ENST00000423265 274 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 SKA2P1-201ENST00000425592 390 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 USP9YP35-201ENST00000435696 412 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 RAD1P2-201ENST00000446414 663 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 snoU13.15-201ENST00000459407 104 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 RPL21P5-201ENST00000554662 472 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL356432.3-201ENST00000568952 465 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.6-201ENST00000603753 252 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.11-201ENST00000604059 253 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.10-201ENST00000604330 253 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AC008162.1-201ENST00000604718 254 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.1-201ENST00000604752 252 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.2-201ENST00000604983 252 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.5-201ENST00000605253 252 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.4-201ENST00000605279 254 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.12-201ENST00000605291 253 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.8-201ENST00000605353 252 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.9-201ENST00000605428 253 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL670379.7-201ENST00000605823 252 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL512598.1-201ENST00000610158 273 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AC073569.3-201ENST00000619055 682 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.88□□□□□ -2.27
TCRBV3S1A0A5B6 AC005539.1-201ENST00000443768 1479 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 SNORA25B-201ENST00000365507 128 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-1005P-201ENST00000384519 107 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 MIR618-201ENST00000385287 98 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AL160275.3-201ENST00000423876 471 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AC007919.1-201ENST00000429380 217 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 CR769776.1-201ENST00000441254 787 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 RPL39P29-201ENST00000447779 157 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AL590365.1-201ENST00000450788 243 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 NDUFA5P7-201ENST00000452914 242 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 MTND2P24-201ENST00000453434 806 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 RNA5SP112-201ENST00000515937 99 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 BPTFP1-201ENST00000579209 492 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 U2.21-201ENST00000637295 81 ntBASIC0.87□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-661P-201ENST00000362409 107 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 SNORA27.3-201ENST00000364937 134 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 RNA5SP240-201ENST00000365355 128 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 Y_RNA.500-201ENST00000384466 111 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 BTF3P8-201ENST00000414577 526 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 ZYG11AP1-201ENST00000430329 837 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 RPS6P15-201ENST00000431996 751 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 RNU7-95P-201ENST00000459222 64 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 SMURF2P1-201ENST00000514992 481 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 SNORD19.2-201ENST00000516978 73 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms