Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RNU6-1143P-201ENST00000516125 104 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 RNU1-95P-201ENST00000516357 160 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 RNU1-128P-201ENST00000516704 160 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 RN7SKP234-201ENST00000517173 224 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 HSBP1P1-201ENST00000555205 166 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 AC109446.1-201ENST00000566172 220 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 AC025627.2-201ENST00000576220 160 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 ELOCP5-201ENST00000604924 333 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 AC004805.2-201ENST00000605382 482 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 AC019176.2-201ENST00000611579 315 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 ASNSP1-201ENST00000518311 1939 ntBASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.26□□□□□ -1.73
HCFC2Q9Y5Z7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.210-201ENST00000364161 110 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 SNORA9-201ENST00000384215 133 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 RNU6-713P-201ENST00000384761 107 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 MIR634-201ENST00000385208 97 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 MTND5P27-201ENST00000428871 1720 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 DYNLT3P2-201ENST00000442517 295 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AL445433.1-201ENST00000457507 257 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 RNA5SP103-201ENST00000459503 118 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC022447.4-201ENST00000504053 364 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 OR5D17P-201ENST00000531492 978 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 LRRC37A5P-203ENST00000580181 585 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC067852.4-201ENST00000590314 478 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 SRGNP1-201ENST00000603392 451 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC007179.3-201ENST00000604976 235 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC005344.1-201ENST00000613391 459 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AL391261.4-201ENST00000616012 481 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC141273.2-201ENST00000618989 130 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 AL034408.1-202ENST00000636088 415 ntBASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
HCFC2Q9Y5Z7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 RNA5SP22-201ENST00000365393 109 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.350-201ENST00000365409 98 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 SNORA5A-201ENST00000384111 134 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.512-201ENST00000384518 102 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.518-201ENST00000384552 113 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.526-201ENST00000384572 110 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 ARL5AP4-201ENST00000430731 512 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 PCMTD1P1-201ENST00000455560 355 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 RPL23AP31-201ENST00000456160 467 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC114801.2-201ENST00000503825 781 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC125232.2-201ENST00000592457 143 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC012669.1-201ENST00000603209 283 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 MIR15A-201ENST00000607334 83 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 BMS1P21-201ENST00000634565 365 ntBASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCFC2Q9Y5Z7 AC233263.6-201ENST00000631132 1963 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms